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1182 Commits
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778e775c35 |
Add secrets provider vaults and remote import (#5429)
## Thinking Path > - Paperclip orchestrates AI-agent companies and needs secrets handling to work across local development, hosted operators, and governed agent execution. > - The affected subsystem is the company-scoped secrets control plane: database schema, server services/routes, CLI workflows, and the Secrets settings UI. > - The gap was that secrets were local-only and operators could not manage provider vaults or import existing remote references without exposing plaintext. > - This branch adds provider vault configuration plus an AWS Secrets Manager remote-import path while preserving company boundaries, binding context, and audit trails. > - I kept the PR to a single branch PR, removed unrelated lockfile/package drift, rebased the full branch onto the current `public-gh/master`, and addressed fresh Greptile findings. > - The benefit is a reviewable implementation of provider-backed secrets with focused tests covering provider selection, import conflicts, deleted secret reuse, rotation guards, and AWS signing behavior. ## What Changed - Added provider vault support for company secrets, including provider config storage, default vault handling, health checks, binding usage, access events, and remote import preview/commit. - Added an AWS Secrets Manager provider using SigV4 request signing, bounded request timeouts, namespace guardrails, cached runtime credential resolution, and external-reference linking without plaintext reads. - Added Secrets UI surfaces for vault management and remote import, plus CLI/API documentation for setup and operations. - Stabilized routine webhook secret binding paths and SSH environment-driver fixture bindings discovered during verification. - Addressed Greptile and CI findings: no lockfile/package drift, monotonic migration metadata, disabled-vault default races, soft-deleted secret hiding/recreate behavior, remove behavior with disabled vaults, soft-deleted external-reference re-import, non-active rotation guards, managed-secret soft deletion through PATCH, and per-call AWS SDK credential client churn. - Rebased this branch onto `public-gh/master` at `0e1a5828` and force-pushed with lease to keep this as the single PR for the branch. ## Verification - `git fetch public-gh master` - `git rebase public-gh/master` - `git diff --name-only public-gh/master...HEAD | grep '^pnpm-lock\.yaml$' || true` confirmed `pnpm-lock.yaml` is not in the PR diff. - Confirmed migration ordering: master ends at `0081_optimal_dormammu`; this PR adds `0082_dry_vision` and `0083_company_secret_provider_configs`. - Inspected migrations for repeat safety: new tables/indexes use `IF NOT EXISTS`; foreign keys are guarded by `DO $$ ... IF NOT EXISTS`; column additions use `ADD COLUMN IF NOT EXISTS`. - `pnpm -r typecheck` passed before the Greptile follow-up commits. - `pnpm test:run` ran the full stable Vitest path before the Greptile follow-up commits; it completed with 3 timing-related failures under parallel load: `codex-local-execute.test.ts`, `cursor-local-execute.test.ts`, and `environment-service.test.ts`. - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/codex-local-execute.test.ts src/__tests__/cursor-local-execute.test.ts src/__tests__/environment-service.test.ts` passed on targeted rerun (`24/24`). - `pnpm build` passed before the Greptile follow-up commits. Vite reported existing chunk-size/dynamic-import warnings. - After Greptile follow-up commits: `pnpm --filter @paperclipai/server exec vitest run src/__tests__/secrets-service.test.ts` passed (`26/26`). - After Greptile follow-up commits: `pnpm --filter @paperclipai/server exec vitest run src/__tests__/aws-secrets-manager-provider.test.ts src/__tests__/secrets-service.test.ts` passed (`39/39`). - After Greptile follow-up commits: `pnpm --filter @paperclipai/server typecheck` passed. - Captured Storybook screenshots from `ui/storybook-static` for visual review. - Latest PR checks on `5ca3a5cf`: `policy`, serialized server suites 1/4-4/4, `Canary Dry Run`, `e2e`, `security/snyk`, and `Greptile Review` pass; aggregate `verify` is still registering the completed child checks. - Greptile review loop continued through the latest requested pass; all Greptile review threads are resolved and the latest `Greptile Review` check on `5ca3a5cf` passed with 0 comments added. ## Screenshots Before: the provider-vault and remote-import surfaces did not exist on `master`; these are after-state screenshots from the Storybook fixtures.    ## Risks - Migration risk: this adds new secret provider tables and extends existing secret rows. The migrations were checked for monotonic ordering and idempotent guards, but reviewers should still inspect upgrade behavior carefully. - Provider risk: AWS support uses direct SigV4 requests. Automated tests cover signing, request timeouts, vault-config selection, namespace guardrails, pending-version archival, sanitized provider errors, and service-level cleanup paths. A real-vault AWS smoke test remains deployment validation for an operator with AWS credentials rather than an unverified merge blocker in this local branch. - UI risk: the Secrets page and import dialog are large new surfaces; screenshots are included above for reviewer inspection. - Verification risk: the full local stable test command hit parallel-load timing failures, although the exact failed files passed when rerun directly. - Operational risk: remote import intentionally avoids plaintext reads; operators must understand that imported external references resolve at runtime and may fail if AWS permissions change. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent with local shell/tool use in the Paperclip worktree. Exact context-window size was not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com> |
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0e1a582831 |
Revert "Add experimental newest-first issue thread" (#5460)
This is actually bad. Glad it was under experiments. |
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a904effb96 |
Add experimental newest-first issue thread (#5455)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies, so issue threads are a core operator surface for reviewing work. > - The issue detail page is the place where humans read agent messages, user comments, and execution context together. > - That thread originally rendered oldest-first, which made recent activity harder to see during active review. > - Reversing the thread order changes navigation expectations, timestamp placement, and the "Jump to latest" affordance, so the UI behavior needed to move as a coherent set. > - Because this is a visible core-product behavior shift, it also needed a safe rollout path instead of becoming the default immediately. > - This pull request adds the newest-first issue thread behavior behind an Experimental setting, updates the thread UI to match that mode, and keeps the legacy oldest-first experience unchanged by default. > - The benefit is that reviewers can opt into a more recent-first issue workflow without forcing a global behavior change on every Paperclip instance. ## What Changed - Reversed issue thread rendering so the newest comments and messages appear first when the experiment is enabled. - Moved the plain comment timestamp into the card header in newest-first mode and kept the legacy timestamp placement for oldest-first mode. - Moved the `Jump to latest` control to the bottom of the thread in newest-first mode while leaving the existing top placement for the legacy mode. - Added the `Enable Newest-First Issue Thread` experimental instance setting and wired issue detail to read that toggle. - Added regression coverage for thread order, timestamp placement, jump-button placement, and the issue-detail experiment toggle behavior. ## Verification - `pnpm -r typecheck` - `pnpm test:run` - `pnpm build` - Focused checks that also passed during issue review: - `pnpm vitest run src/components/IssueChatThread.test.tsx src/pages/IssueDetail.test.tsx` in `ui/` - `pnpm vitest run src/__tests__/instance-settings-routes.test.ts` in `server/` - Manual review path: - Enable `Instance Settings > Experimental > Enable Newest-First Issue Thread` - Open an issue with comments/messages and confirm newest activity renders first, timestamps move into the header, and `Jump to latest` sits below the thread - Disable the experiment and confirm the legacy oldest-first behavior returns ## Risks - Low risk: the behavioral change is gated behind an instance-level experimental toggle and defaults off. - The main regression risk is thread navigation drift between the two modes, especially around anchor scrolling and the `Jump to latest` affordance. - There is some UI coupling between issue-detail query state and experimental settings fetches, so future changes in that area should keep both modes covered. - Screenshots are not attached in this PR body; verification is described with automated coverage and manual steps instead. > I checked [`ROADMAP.md`](ROADMAP.md). This is a scoped issue-thread UX improvement and rollout gate, not a duplicate of a roadmap-level planned core feature. ## Model Used - OpenAI Codex via the local `codex_local` Paperclip adapter, GPT-5-based coding agent with terminal tool use and local code execution in this repository worktree. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge |
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824298f414 |
Route sidebar search icon directly to search (#5440)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Operators use the sidebar as their primary board navigation surface > - The board now has a dedicated search page, so the header search icon should behave as normal navigation instead of only dispatching a command-palette shortcut > - The Work nav also had a separate Search row, which duplicated the always-visible header search affordance > - This pull request keeps search one click away while making it a direct `/search` link and reducing sidebar nav noise > - The benefit is a smaller, clearer sidebar with search still accessible from the top-level chrome ## What Changed - Changed the sidebar header search icon into a direct `NavLink` to `/search`. - Removed the duplicate `Search` row from the Work navigation section. - Added focused Sidebar coverage that asserts the header search link target and confirms Search is not rendered in the Work nav. - Refactored the Sidebar test setup helper to avoid repeating the React Query wrapper across tests. ## Verification - `pnpm install --frozen-lockfile` in the PR worktree so workspace package symlinks existed for test execution. This completed with existing plugin SDK bin warnings for missing built artifacts. - `pnpm exec vitest run ui/src/components/Sidebar.test.tsx` — 3 passed. - `pnpm --filter @paperclipai/ui typecheck` — passed. ## Risks - Low: this changes a sidebar navigation affordance only. Users who previously clicked the header icon now land on the full search page instead of opening the command-palette shortcut path. - Low: removing the Work nav Search row could affect users who expected Search in that section, but the icon remains in the fixed sidebar header and is covered by a targeted DOM test. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent, GPT-5 model family (`gpt-5`), tool-enabled Paperclip heartbeat environment. Context window and internal reasoning mode are not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots or equivalent focused UI verification - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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e400315cbf |
Guard assigned backlog liveness (#5428)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The issue graph and liveness recovery system decide whether assigned work is executable or parked > - Assigned issues created without an explicit status could silently land in backlog, making parents look blocked with no productive wake path > - The server, shared validators, recovery analysis, and UI all need to agree on that execution semantic > - This pull request makes assigned issue creation default to `todo`, flags assigned backlog blockers, and surfaces the state in the board > - The benefit is that parked assigned work becomes intentional and visible instead of creating silent liveness stalls ## What Changed - Adds contract tests for assigned issue creation defaults. - Defaults assigned issue creation to `todo` when status is omitted while preserving explicit `backlog` parking. - Exposes `resolveCreateIssueStatusDefault` through shared validators. - Teaches liveness/blocker attention paths to distinguish assigned backlog blockers. - Adds UI notices, row/header badges, and issue detail safeguards for assigned backlog blockers. - Adds Storybook fixtures and execution-semantics documentation for the assigned-backlog behavior. ## Verification - `pnpm run preflight:workspace-links && pnpm exec vitest run packages/shared/src/validators/issue.test.ts server/src/__tests__/issue-assigned-backlog-contract-routes.test.ts server/src/__tests__/issue-blocker-attention.test.ts server/src/__tests__/issue-liveness.test.ts server/src/__tests__/heartbeat-issue-liveness-escalation.test.ts ui/src/components/IssueAssignedBacklogNotice.test.tsx ui/src/components/IssueRow.test.tsx` — 50 passed, 23 skipped. - Skipped tests were embedded Postgres suites on this host with the repo skip message: `Postgres init script exited with code null. Please check the logs for extra info. The data directory might already exist.` - Pairwise merge check against the issue-controls PR branch completed without conflicts via `git merge --no-commit --no-ff` in a temporary worktree. - Screenshots for assigned-backlog UI states: [light](docs/pr-screenshots/pr-5428/assigned-backlog-light.png), [dark](docs/pr-screenshots/pr-5428/assigned-backlog-dark.png). - Follow-up checks: `pnpm --filter /ui typecheck`; `pnpm --filter /mcp-server build`; `pnpm --filter /mcp-server test`; `pnpm exec vitest run packages/shared/src/validators/issue.test.ts`; focused UI component tests. - Remote PR checks on head `6300b3c`: policy, verify, serialized server shards 1/4-4/4, Canary Dry Run, e2e, Greptile Review, and Snyk all passed. ## Risks - Medium: changes status defaulting for assigned issue creation when the caller omits status. Explicit `backlog` remains supported, and server/shared tests cover both paths. - Medium: liveness classification changes can affect blocker attention labels; focused service and UI tests cover the new assigned-backlog state. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent, GPT-5 model family (`gpt-5`), tool-enabled Paperclip heartbeat environment. Context window and internal reasoning mode are not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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6f30003421 |
Polish operator UI task controls (#5427)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Operators spend most of their day scanning skills, routines, inbox groups, and activity cards > - Several small UI rough edges made those surfaces harder to scan or easier to crash on real API payloads > - These fixes are grouped together because they are low-risk operator quality-of-life improvements rather than separate control-plane contracts > - This pull request polishes skills metadata, routine run-now access, grouped issue creation defaults, monitor activity rendering, and activity row identity layout > - The benefit is a smoother board workflow with fewer small interruptions while keeping the change set compact ## What Changed - Improves company skill source display and the used-by agent list. - Truncates long skill source paths and adds a copy affordance. - Adds a row-level run-now button to the routines table. - Adds grouped issue creation defaults for inbox issue groups and aligns grouped add buttons to the right. - Fixes `IssueMonitorActivityCard` when `monitorNextCheckAt` arrives as an ISO string. - Polishes activity row actor avatar/name layout by using the shared avatar primitive. ## Verification - `pnpm run preflight:workspace-links && pnpm exec vitest run ui/src/pages/Routines.test.tsx ui/src/components/IssuesList.test.tsx ui/src/lib/inbox.test.ts ui/src/components/IssueMonitorActivityCard.test.tsx` — 91 passed. - The routines test emitted the pre-existing Radix warning about missing `DialogTitle`/description in dialog content; tests still passed. - Pairwise merge checks against the other two PR branches reported no textual conflicts. ## Risks - Low: changes are UI-focused and covered by targeted component/lib tests. - Low-to-medium: activity row layout changes could affect dense feed scanability; the implementation uses the shared avatar component and keeps truncation behavior. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent, GPT-5 model family (`gpt-5`), tool-enabled Paperclip heartbeat environment. Context window and internal reasoning mode are not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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772fc92619 |
Add issue controls and retry-now recovery (#5426)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Issue operators need clear controls for execution settings, model overrides, and recovery retries > - Existing issue properties hid useful adapter override state and did not expose a board-triggered retry for scheduled heartbeat recovery > - Scheduled retries also need to respect the same safety gates as normal execution instead of bypassing budget, review, pause, dependency, or terminal-state checks > - This pull request adds the issue property controls and retry-now surfaces together because they share the issue details/properties UI > - The benefit is that operators can inspect and adjust issue execution settings and safely trigger pending scheduled recovery without hidden control-plane behavior ## What Changed - Adds editable issue assignee model override controls in `IssueProperties`, with focused coverage. - Removes the stale workspace tasks link from issue properties. - Adds a scheduled retry `retry-now` backend path and shared response types. - Adds main-pane and properties-pane scheduled retry UI, backed by a shared `useRetryNowMutation` hook. - Adds suppression coverage for budget hard stops, review participant changes, subtree pause holds, unresolved blockers, terminal issues, and company scoping. - Updates the `IssueProperties` test harness with toast actions required by the retry-now hook. ## Verification - `pnpm exec vitest run ui/src/components/IssueProperties.test.tsx ui/src/components/IssueScheduledRetryCard.test.tsx` — 31 passed. - `pnpm exec vitest run server/src/__tests__/issue-scheduled-retry-routes.test.ts` — exited 0, but this host skipped the embedded Postgres route tests with: `Postgres init script exited with code null. Please check the logs for extra info. The data directory might already exist.` - Pairwise merge check against the assigned-backlog PR branch completed without conflicts via `git merge --no-commit --no-ff` in a temporary worktree. ### Visual verification screenshots Storybook story: `Product/Issue Scheduled retry surfaces / ScheduledRetrySurfaces`.   ## Risks - Medium: this touches issue execution/retry behavior, so CI should run the embedded Postgres route tests on a host that can initialize Postgres. - Low-to-medium UI risk around duplicated retry-now entry points; both surfaces share one mutation hook to keep behavior consistent. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent, GPT-5 model family (`gpt-5`), tool-enabled Paperclip heartbeat environment. Context window and internal reasoning mode are not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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d0e9cc76f2 |
Show workspace changes and stale notices in issue threads (#5356)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The issue thread is the operator's durable audit trail for what changed and why > - Workspace changes and stale disposition notices need to be visible in that same timeline without noisy or misleading rendering > - The local branch already contained backend activity details, timeline conversion, and UI rendering work for those events > - This pull request isolates the issue-thread activity work into a standalone branch against `origin/master` > - The benefit is a focused audit-trail PR that can merge independently of the sidebar/operator UI polish branch ## What Changed - Adds readable workspace-change activity details to issue update activity events. - Surfaces workspace-change events in issue chat/timeline rendering. - Makes the existing issue comment migration idempotent. - Folds and renders stale disposition notices inline so they match activity-log styling and spacing. - Adds focused route, timeline, and issue-thread system notice coverage. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run server/src/__tests__/issue-activity-events-routes.test.ts ui/src/lib/issue-timeline-events.test.ts ui/src/components/IssueChatThreadSystemNotice.test.tsx` — 3 files passed, 22 tests passed. - Confirmed the PR changes 9 files and does not include `pnpm-lock.yaml` or `.github/workflows/*`. - `pnpm exec vitest run server/src/__tests__/issue-closed-workspace-routes.test.ts` — 1 file passed, 4 tests passed. - `pnpm exec vitest run server/src/__tests__/issue-activity-events-routes.test.ts ui/src/lib/issue-timeline-events.test.ts ui/src/components/IssueChatThreadSystemNotice.test.tsx server/src/services/recovery/successful-run-handoff.test.ts packages/shared/src/validators/issue.test.ts` — 5 files passed, 54 tests passed. - `pnpm --filter @paperclipai/shared typecheck && pnpm --filter @paperclipai/server typecheck && pnpm --filter @paperclipai/ui typecheck`. - `pnpm --filter @paperclipai/ui typecheck` after adding the Storybook screenshot fixture. - Captured Storybook screenshots for the new UI rendering paths: - Collapsed stale notice + workspace-change row: `docs/pr-screenshots/pr-5356/issue-thread-notices-collapsed.png` - Expanded stale notice details: `docs/pr-screenshots/pr-5356/issue-thread-notices-expanded.png` ### Screenshots Collapsed stale notice with workspace-change row:  Expanded stale notice details:  ## Risks - Moderate risk: this touches issue activity serialization and issue-thread rendering, both of which are central operator surfaces. - Migration risk is low: the only migration change makes an existing migration idempotent. - No new migrations are introduced, so there is no cross-PR migration ordering requirement. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, shell/tool-use enabled, used to split the existing branch, verify the isolated PR branch, and create this PR. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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4103978578 |
Polish operator sidebar and issue property controls (#5355)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Operators use the board sidebar and issue properties panel to move between companies and understand task metadata > - Small UI regressions in these controls make repeated board operation slower and less predictable > - The local branch already contained targeted fixes for company ordering, issue date display, and sidebar rail sizing > - This pull request isolates those operator UI quality-of-life fixes into a standalone branch against `origin/master` > - The benefit is a focused, reviewable PR that can merge independently of the issue-thread activity work ## What Changed - Shows issue property timestamps with time, not just dates. - Adds edit-mode support for ordering companies in the sidebar company menu. - Fixes a workspace switcher rail regression and keeps the account menu aligned with the rail width. - Includes focused component coverage for the touched controls. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run ui/src/components/IssueProperties.test.tsx ui/src/components/SidebarCompanyMenu.test.tsx ui/src/components/Layout.test.tsx ui/src/components/SidebarAccountMenu.test.tsx` — 4 files passed, 29 tests passed. - `pnpm --filter /ui typecheck` - PR checks on `a4030f7a` are green: policy, verify, serialized server suites 1/4-4/4, e2e, Canary Dry Run, Greptile Review, and Snyk. - Captured a local Storybook screenshot of `Product/Navigation & Layout` after the sidebar polish: `/tmp/pap-3659-screenshots/navigation-layout-after.png`. - Confirmed the PR changes 8 files and does not include `pnpm-lock.yaml` or `.github/workflows/*`. ## Risks - Low to moderate UI risk: this touches shared sidebar components and issue metadata rendering. - The company ordering behavior depends on existing query/cache behavior, so stale cache bugs would show up as ordering inconsistencies. - No database, API, workflow, or lockfile changes are included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, shell/tool-use enabled, used to split the existing branch, verify the isolated PR branch, and create this PR. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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68f69975a4 |
Harden control-plane safety and issue identifiers (#5292)
## Thinking Path > - Paperclip relies on issue identifiers, execution policies, and agent heartbeat rules to keep autonomous work auditable. > - Safety checks need to reject ambiguous agent handoffs, and identifier parsing needs to support Cloud tenant prefixes. > - Agent instructions also need to make final-disposition rules explicit so work does not stall in vague states. > - This pull request isolates backend correctness and governance hardening from the UI and recovery-system-notice branches. > - The benefit is safer in-review transitions, better identifier compatibility, and clearer agent operating contracts. ## What Changed - Fixed run-aware confirmation ordering and interrupted-run state cleanup. - Added Cloud tenant identity bootstrap and alphanumeric issue identifier support across shared parsing and server routes. - Guarded agent-authored `in_review` updates unless a real review path exists. - Tightened heartbeat disposition instructions in adapter utilities/default AGENTS/Paperclip skill. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run packages/shared/src/issue-references.test.ts server/src/__tests__/issue-identifier-routes.test.ts server/src/__tests__/issue-execution-policy-routes.test.ts packages/adapter-utils/src/server-utils.test.ts` initially had the first execution-policy test hit Vitest's 5s timeout under the parallel bundle while the rest passed. - `pnpm exec vitest run server/src/__tests__/issue-execution-policy-routes.test.ts --testTimeout=20000` passed with 10/10 tests. - Follow-up: `pnpm run typecheck:build-gaps` passed. - Follow-up: `pnpm --filter @paperclipai/ui typecheck` passed. - Follow-up: `pnpm vitest run server/src/__tests__/issue-comment-reopen-routes.test.ts server/src/__tests__/company-portability.test.ts server/src/__tests__/costs-service.test.ts` passed. - Follow-up: `pnpm vitest run ui/src/context/LiveUpdatesProvider.test.ts ui/src/lib/issue-chat-messages.test.ts ui/src/lib/issue-reference.test.ts ui/src/lib/issue-timeline-events.test.ts` passed. ## Risks - Medium control-plane risk: in-review update validation changes agent behavior. The error message is explicit and tests cover allowed review paths. ## Model Used - OpenAI GPT-5 Codex via Paperclip `codex_local` adapter, with shell/git/GitHub CLI tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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a1b30c9f35 |
Add planning mode for issue work (#5353)
## Thinking Path > - Paperclip is a control plane for autonomous AI companies. > - Issues are the core unit of work, and issue comments are how board users and agents coordinate execution. > - Some issue conversations need to produce plans and approvals instead of immediate implementation work. > - The existing issue contract did not distinguish standard execution comments from planning-oriented issue work. > - This pull request adds an issue work-mode contract and board UI affordances for standard vs planning mode. > - The benefit is that planning-mode issues can be created, displayed, discussed, and carried through agent heartbeat context without losing the normal issue workflow. ## What Changed - Added `standard` / `planning` issue work-mode contracts across DB, shared validators/types, server issue flows, plugin protocol, and adapter heartbeat payloads. - Added an idempotent `0081_optimal_dormammu` migration for `issues.work_mode`, ordered after current `public-gh/master` migrations. - Updated heartbeat/context summaries and issue-thread interaction behavior so planning work mode is preserved when creating suggested follow-up issues. - Added UI support for planning-mode issue creation, issue rows, detail composer styling, and composer work-mode toggles. - Added focused server/shared/UI tests plus a Playwright visual verification spec for planning-mode surfaces. - Rebased the branch onto current `public-gh/master` and added durable planning-mode screenshots under `doc/assets/pap-3368/`. ## Verification - `pnpm --filter @paperclipai/db run check:migrations` - `pnpm exec vitest run --project @paperclipai/shared packages/shared/src/validators/issue.test.ts` - `pnpm exec vitest run --project @paperclipai/server server/src/__tests__/heartbeat-context-summary.test.ts server/src/__tests__/issue-thread-interactions-service.test.ts server/src/__tests__/issues-goal-context-routes.test.ts --pool=forks --poolOptions.forks.isolate=true` - `pnpm exec vitest run --project @paperclipai/ui ui/src/components/IssueChatThread.test.tsx ui/src/components/NewIssueDialog.test.tsx ui/src/components/IssueRow.test.tsx ui/src/pages/IssueDetail.test.tsx` - `pnpm exec vitest run --project @paperclipai/adapter-utils packages/adapter-utils/src/server-utils.test.ts` - `PAPERCLIP_E2E_SKIP_LLM=true npx playwright test --config tests/e2e/playwright.config.ts tests/e2e/planning-mode-visual-verification.spec.ts` ## Screenshots Desktop planning detail:  Desktop planning row:  Desktop staged standard toggle:  Mobile planning detail:  Mobile planning row:  ## Risks - Medium migration risk: this adds a non-null issue column. The migration uses `ADD COLUMN IF NOT EXISTS` so installations that applied an older branch-local migration number can still apply the final numbered migration safely. - Medium contract risk: issue payloads, plugin payloads, and adapter heartbeat payloads now include work mode; compatibility is handled by defaulting missing values to `standard`. - UI risk is moderate because composer controls changed; focused component tests and visual e2e coverage exercise standard vs planning display and toggle behavior. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent in a local Paperclip worktree, with shell/tool use. Exact context-window size is not exposed in this runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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320fd5d23b |
Add full company search page (#5293)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Operators need to find work, documents, agents, projects, comments, and activity across a company without jumping through separate surfaces. > - The existing Command-K flow was useful for fast navigation but not enough for deeper company-wide discovery. > - Search also needs company-scoped backend contracts, query cost controls, and indexed document matching so it stays safe as company data grows. > - This pull request adds a full company search API and a dedicated board search page that Command-K can hand off to. > - The benefit is a single searchable control-plane surface with richer result context, recents, highlights, and test coverage across server and UI behavior. ## What Changed - Added a company-scoped search endpoint/service with query validation, rate limiting, text matching, fuzzy title matching, and result typing shared through `@paperclipai/shared`. - Added idempotent search migrations for document search indexes and fuzzy matching support. - Added the full `/companies/:companyKey/search` UI, search result row components, highlighted snippets, recent searches, and sidebar/Command-K handoff. - Added Storybook coverage for search surfaces and Vitest coverage for server search behavior, rate limiting, route generation, Command-K behavior, and the search page. - Addressed Greptile findings by renaming the no-match SQL helper, applying search pagination after cross-type merge sorting, and lazy-initializing the default search service so unrelated route-test mocks do not need to know about it. - Merged current `public-gh/master` and renumbered the search migrations behind upstream `0078_white_darwin`: search indexes are now `0079_company_search_document_indexes` and fuzzy matching is `0080_company_search_fuzzystrmatch`. ## Verification - `git fetch public-gh master` - `git diff --check public-gh/master...HEAD` - `git diff --name-only public-gh/master...HEAD | rg '^pnpm-lock\.yaml$' || true` produced no output before opening the PR. - `pnpm run preflight:workspace-links && pnpm exec vitest run server/src/__tests__/company-search-service.test.ts server/src/__tests__/company-search-rate-limit-routes.test.ts ui/src/pages/Search.test.tsx ui/src/components/CommandPalette.test.tsx ui/src/lib/company-routes.test.ts` passed: 5 files, 25 tests. - `pnpm --filter @paperclipai/shared typecheck && pnpm --filter @paperclipai/db typecheck && pnpm --filter @paperclipai/server typecheck && pnpm --filter @paperclipai/ui typecheck` passed. - `pnpm exec vitest run server/src/__tests__/company-search-service.test.ts server/src/__tests__/company-search-rate-limit-routes.test.ts && pnpm --filter @paperclipai/server typecheck` passed after Greptile pagination fixes. - `pnpm exec vitest run server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts server/src/__tests__/company-search-rate-limit-routes.test.ts server/src/__tests__/company-search-service.test.ts && pnpm --filter @paperclipai/server typecheck` passed after the CI mock fix. - After resolving the migration conflict with current `public-gh/master`: `pnpm --filter @paperclipai/db typecheck && pnpm exec vitest run server/src/__tests__/company-search-service.test.ts server/src/__tests__/company-search-rate-limit-routes.test.ts && pnpm --filter @paperclipai/server typecheck` passed. - DB migration numbering check passed as part of `@paperclipai/db` typecheck. - UI states are covered by the added Storybook stories in `ui/storybook/stories/search.stories.tsx`. - GitHub reports the PR merge state as `CLEAN` on head `18e54fa8`. - GitHub PR checks are green on head `18e54fa8`: policy, verify, serialized server shards 1/4 through 4/4, e2e, canary dry run, Snyk, and Greptile Review. ## Risks - Search ranking and snippets are new user-facing behavior, so reviewers should check whether result ordering feels right on real company data. - Search touches broad company data, so company scoping and query cost/rate-limit behavior should be reviewed carefully. - The migrations add search indexes/extensions; they are idempotent with `IF NOT EXISTS` for users who may have applied an earlier branch migration number. > ROADMAP.md checked. This PR adds a focused board search surface and does not duplicate an open roadmap item. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-enabled shell/git/GitHub CLI session with medium reasoning effort. Existing branch commits were produced across prior agent sessions; this packaging pass verified, opened the PR, addressed Greptile findings, resolved migration conflicts after upstream PRs landed, and got PR checks green. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com> |
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424e81d087 |
Improve operator workflow QoL (#5291)
## Thinking Path > - Paperclip is a control plane operators use repeatedly to supervise agent companies. > - Common operator workflows depend on fast scanning of inboxes, issue sidebars, workspaces, cost totals, and runtime services. > - Several small UI and service gaps made those workflows slower or less clear. > - This pull request groups the operator-facing QoL changes that can stand alone from recovery and adapter work. > - The benefit is a denser, clearer board experience for issue triage and workspace operation. ## What Changed - Added inbox assignee/project grouping and issue list token/runtime totals. - Improved issue properties with removable blocker chips and workspace task links. - Improved execution workspace layout, runtime controls, issues tab default, and stopped-port reuse behavior. - Added mobile markdown/routine dialog fixes, page title company names, sidebar polish, and dashboard run task label cleanup. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run ui/src/lib/inbox.test.ts ui/src/components/IssueProperties.test.tsx ui/src/components/WorkspaceRuntimeControls.test.tsx server/src/__tests__/workspace-runtime.test.ts server/src/__tests__/costs-service.test.ts` ## Risks - Medium UI risk because this touches several operator surfaces. The branch is intentionally grouped around workflow/QoL files and keeps the file count below the Greptile limit. ## Model Used - OpenAI GPT-5 Codex via Paperclip `codex_local` adapter, with shell/git/GitHub CLI tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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11ffd6f2c5 |
Improve ACPX adapter configuration (#5290)
## Thinking Path > - Paperclip orchestrates AI agents across several adapter implementations. > - ACPX is a local adapter path that can proxy Claude and Codex-style execution. > - Its configuration needed stronger schema defaults, provider-aware model handling, and better UI support. > - Plugin authors also need clear docs for managed resources. > - This pull request improves ACPX adapter configuration and documents plugin-managed resources. > - The benefit is a more predictable adapter setup path without changing unrelated control-plane behavior. ## What Changed - Improved ACPX config schema, execution config handling, UI build config, and route coverage. - Added ACPX model filtering support and tests. - Updated the agent config form and storybook coverage for ACPX model/provider behavior. - Expanded plugin authoring documentation for managed resources. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run server/src/__tests__/acpx-local-execute.test.ts server/src/__tests__/adapter-routes.test.ts ui/src/lib/acpx-model-filter.test.ts` ## Risks - Low-to-medium risk: adapter configuration behavior changes can affect ACPX users, but the change is isolated to ACPX/plugin-doc surfaces and covered by targeted adapter tests. ## Model Used - OpenAI GPT-5 Codex via Paperclip `codex_local` adapter, with shell/git/GitHub CLI tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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454edfe81e |
Add recovery handoff system notices (#5289)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Agent runs can end productively while the source issue still lacks a durable final disposition. > - That leaves the control plane unsure whether to resume, escalate, or close the work. > - Issue comments also need a presentation contract so system-authored recovery notices can render as first-class thread messages without overloading normal comments. > - This pull request adds successful-run handoff recovery, comment presentation metadata, and system notice rendering. > - The benefit is stricter task liveness with clearer operator-facing recovery state. ## What Changed - Added successful-run handoff decisions, wake payloads, escalation behavior, and recovery tests. - Added issue comment presentation metadata with migration `0078_white_darwin.sql` and shared/server/company portability support. - Rendered recovery/system notices in issue chat with dedicated UI components, fixtures, tests, and storybook/lab coverage. - Included the current recovery model-profile hint patch so automatic recovery follow-ups use the cheap profile. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run server/src/services/recovery/successful-run-handoff.test.ts ui/src/components/SystemNotice.test.tsx ui/src/lib/system-notice-comment.test.ts ui/src/components/IssueChatThreadSystemNotice.test.tsx` ## Risks - Migration-bearing PR: merge this before any other branch that might later add a migration. - The branch touches both recovery services and issue-thread rendering, so review should pay attention to recovery wake idempotency and comment metadata compatibility. ## Model Used - OpenAI GPT-5 Codex via Paperclip `codex_local` adapter, with shell/git/GitHub CLI tool use. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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83e7ecc58e |
Preserve scope on manual heartbeat invokes (#5323)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The agent live-run route lets operators trigger a manual heartbeat invocation so an agent can pick up a specific issue or step out of band > - The current route flow drops the caller's scope (issue/run context) when forwarding the manual invoke into the heartbeat service, so the resulting run loses the targeting the operator specified > - This pull request threads the operator-supplied scope through the manual invoke path on both the server route and the UI client, with a regression test that confirms the scope round-trips > - The benefit is manual heartbeat invokes from the live-run UI actually pick up the scoped issue/run instead of falling through to the agent's default routine ## What Changed - `server/src/routes/agents.ts`: forward the operator-supplied scope into the manual invoke heartbeat service call - `server/src/__tests__/agent-live-run-routes.test.ts`: new test verifying the manual invoke path preserves scope - `ui/src/api/agents.ts`: pass scope through the live-run client API ## Verification - `pnpm vitest run --no-coverage server/src/__tests__/agent-live-run-routes.test.ts` - `pnpm typecheck` clean ## Risks Low. The change is purely additive on the route surface — handlers that did not previously pass scope continue to work; handlers that did pass it now have it preserved instead of dropped. ## Model Used Claude Opus 4.7 (1M context) ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable — new test covers the preserved-scope path - [x] If this change affects the UI, I have included before/after screenshots — N/A (internal API change, no visible UI shift) - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge |
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d6d7a7cea6 |
Add routine revision history and restore flow (#5285)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies. > - Routines are the scheduled/recurring work surface that keeps a company operating without manual kicks. > - Operators need routine edits to be auditable and recoverable, especially when routines control assignments, prompts, triggers, and webhook secrets. > - Documents already have revision-style safety, but routines did not have equivalent history or restore semantics. > - This pull request adds append-only routine revisions across the database, shared contracts, server routes, and board UI. > - The benefit is safer routine iteration: users can inspect history, compare changes, restore older definitions, and avoid overwriting newer edits. ## What Changed - Added `routine_revisions` storage, latest revision pointers on routines, shared types, validators, and API docs for routine revision history. - Added server service/route support for listing routine revisions, conflict-aware routine saves, and append-only restore operations. - Added a History tab on routine detail with revision preview, structured change summaries, description line diffs, dirty-edit blocking, restore confirmation, and restored webhook secret surfacing. - Extracted the line diff helper from `DocumentDiffModal` into `ui/src/lib/line-diff.ts` for reuse. - Rebased the branch onto current `public-gh/master` and renumbered the routine revision migration to `0077_unusual_karnak` after upstream `0076_useful_elektra`. - Made the `0077` routine revision migration idempotent so installs that already applied the branch-local `0076_unusual_karnak` can safely advance. - Updated the plugin SDK test harness routine fixture with the new revision fields required by the shared `Routine` contract. ## Verification - `pnpm --filter @paperclipai/db run check:migrations` passed. - `pnpm exec vitest run --project @paperclipai/shared packages/shared/src/validators/routine.test.ts` passed. - `pnpm exec vitest run --project @paperclipai/ui ui/src/lib/line-diff.test.ts ui/src/components/RoutineHistoryTab.test.tsx ui/src/lib/workspace-routines.test.ts ui/src/pages/Routines.test.tsx` passed. - `pnpm exec vitest run --project @paperclipai/server server/src/__tests__/routines-service.test.ts --pool=forks --poolOptions.forks.isolate=true` passed. - `pnpm exec vitest run --project @paperclipai/server server/src/__tests__/routines-routes.test.ts --pool=forks --poolOptions.forks.isolate=true` passed. - `pnpm --filter @paperclipai/plugin-sdk typecheck` passed after updating the SDK test harness fixture. - `pnpm --filter @paperclipai/plugin-sdk build` passed; this refreshed local generated SDK output needed by plugin example typechecks. - `pnpm -r typecheck` passed. ## Risks - Medium migration risk: this adds routine revision storage and backfills existing routines. The migration is ordered after upstream `0076` and uses `IF NOT EXISTS` / duplicate-object guards to tolerate earlier branch-local migration application. - Restore behavior intentionally appends a new revision instead of mutating history; callers expecting an in-place rollback need to follow the new latest revision pointer. - Restoring webhook triggers recreates webhook secret material, so users must copy newly surfaced secrets after restore. - Conflict-aware saves now reject stale routine edits when the client sends an older `baseRevisionId`. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5-based coding agent, with shell/tool use in a local git worktree. Exact context-window size is not exposed in this runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Screenshots: not attached in this draft PR; the new UI flow is covered by component tests listed above. --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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3c73ed26b5 |
Expand plugin host surface (#5205)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The plugin system is the extension boundary for optional product capabilities > - Rich plugins need more than a worker entrypoint: they need scoped database storage, local project folders, managed agents/routines, host navigation, and reusable UI components > - The LLM Wiki work exposed those missing host surfaces while keeping plugin code outside the core control plane > - This pull request expands the core plugin host, SDK, server APIs, and UI bridge so plugins can declare and use those surfaces > - The benefit is that future plugins can integrate with Paperclip through documented, validated contracts instead of bespoke server or UI imports ## What Changed - Added plugin-managed database namespaces and migration tracking, including Drizzle schema/migration files and SQL validation for namespace isolation. - Added server support for plugin local folders, managed agents, managed routines, scoped plugin APIs, and plugin operation visibility. - Expanded shared plugin manifest/types/validators and SDK host/testing/UI exports for richer plugin surfaces. - Added reusable UI pieces for file trees, managed routines, resizable sidebars, route sidebars, and plugin bridge initialization. - Updated plugin docs and example plugins to use the expanded host and SDK surface. ## Verification - `pnpm install --frozen-lockfile` - `pnpm run preflight:workspace-links && pnpm exec vitest run packages/shared/src/validators/plugin.test.ts server/src/__tests__/plugin-database.test.ts server/src/__tests__/plugin-local-folders.test.ts server/src/__tests__/plugin-managed-agents.test.ts server/src/__tests__/plugin-managed-routines.test.ts server/src/__tests__/plugin-orchestration-apis.test.ts ui/src/api/plugins.test.ts ui/src/components/FileTree.test.tsx ui/src/components/ResizableSidebarPane.test.tsx ui/src/pages/PluginPage.test.tsx ui/src/plugins/bridge.test.ts` passed: 11 files, 67 tests. - Confirmed this PR changes 89 files and does not include `pnpm-lock.yaml` or `.github/workflows/*`. ## Risks - Medium: this expands plugin host contracts across db/shared/server/ui and includes a new core migration (`0076_useful_elektra.sql`). - The plugin database namespace validator is intentionally restrictive; plugin authors may need follow-up affordances for SQL patterns that remain blocked. - Merge this before the LLM Wiki plugin PR so the plugin can resolve the new SDK and host APIs. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-enabled shell/git/GitHub workflow. Context window size was not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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d6bee62f02 |
Fix Cloud tenant issue identifier routes (#5196)
## Summary - Allow Cloud tenant issue identifiers with alphanumeric prefixes, such as `PC1897-1`, to normalize as issue references. - Resolve those identifiers through issue detail/update routes, active run/live run polling, activity, costs, and `issueService.getById`. - Keep UI issue-link parsing aligned so tenant links normalize back to `/issues/<IDENTIFIER>`. ## Root Cause Cloud tenant issue prefixes include digits from the stack-id hash. The app-side route normalization still accepted only all-letter prefixes, so `/api/issues/PC1897-1` skipped identifier lookup and fell through as a non-UUID id. ## Verification - `pnpm exec vitest run packages/shared/src/issue-references.test.ts ui/src/lib/issue-reference.test.ts server/src/__tests__/issue-identifier-routes.test.ts server/src/__tests__/activity-routes.test.ts server/src/__tests__/costs-service.test.ts server/src/__tests__/agent-live-run-routes.test.ts server/src/__tests__/issues-service.test.ts` - `pnpm --filter @paperclipai/shared typecheck && pnpm --filter @paperclipai/server typecheck` - `git diff --check` Co-authored-by: Paperclip <noreply@paperclip.ing> |
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bb7d040894 |
Switch OpenCode to explicit static/local-aware model selection (#5117)
> **Stacked PR (part 4 of 7).** Depends on: - PR #5114 - PR #5115 - PR #5116 > Diff against `master` includes commits from earlier PRs in the stack — the new commit in this PR is the topmost one. ## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - When creating an OpenCode-local agent, Paperclip currently validates > `adapterConfig.model` against the *Paperclip host's* `opencode models` output > - SSH testing surfaced that this blocks creating an OpenCode agent for an SSH > environment: the model that exists on the SSH target isn't visible to the > host, so creation fails with "OpenCode requires `adapterConfig.model` in > provider/model format" even when the operator picked a real remote model > - The initial direction was environment-aware model discovery; the final > decision was to keep OpenCode on the same explicit-model pattern as other > adapters (default + curated list + manual override) and stop blocking > creation on host-side discovery > - This PR does both: the adapter-models endpoint now accepts `environmentId` and > probes against the target environment, and the create-time hard gate is > replaced by `requireOpenCodeModelId` which validates `provider/model` *format* > without requiring host-local discovery. Test/run-time still surfaces real > auth/availability problems > - The benefit is that operators can create OpenCode agents for remote > environments without out-of-band setup, and the model picker in the UI > reflects the actually-targeted environment ## What Changed - Added `requireOpenCodeModelId(input)` in `opencode-local/src/server/models.ts`, exported it from the adapter index - `ensureOpenCodeModelConfiguredAndAvailable` now delegates the format check to `requireOpenCodeModelId` - `agentsApi.adapterModels(companyId, adapterType, { environmentId })` now accepts an environment ID and passes it as a query parameter - `queryKeys.agents.adapterModels` now keys on `(companyId, adapterType, environmentId)` - `server/src/routes/agents.ts` reads and validates the new query parameter, forwarding it to the adapter's model probe - `AgentConfigForm.tsx` and `OnboardingWizard.tsx` build the model query key from the currently selected default environment ID and disable autodetect for `opencode_local` (model selection is explicit) - `NewAgent.tsx` simplified — no longer special-cases OpenCode autodetect - `company-portability.ts` no longer needs OpenCode-specific autodetect handling - Tests added/updated: `adapter-model-refresh-routes.test.ts`, `adapter-models.test.ts`, `agent-permissions-routes.test.ts`, `opencode-local/src/server/models.test.ts` ## Verification - `pnpm --filter @paperclipai/server test -- adapter-models adapter-model-refresh agent-permissions` - `pnpm --filter @paperclipai/adapter-opencode-local test` - `pnpm --filter @paperclipai/ui test -- AgentConfigForm OnboardingWizard NewAgent` - Manual QA in browser: 1. Boot Paperclip on Tailscale-bound port (so it's reachable from another machine), create an OpenCode-local agent, switch the default environment between two installed sandboxes, and confirm the model list refreshes per-environment 2. Submit with a malformed `provider/model` string and verify the new `requireOpenCodeModelId` error surfaces - Before/after screenshots attached for `AgentConfigForm` model picker ## Risks - Behavioural shift: switching default environment now triggers a model refetch. Should be cheap but introduces a new UI loading state for OpenCode users. - Removing dynamic autodetect for OpenCode: if any user configured an agent without specifying `model` and relied on autodetect populating it, that agent will now fail at submit time. Mitigation: validation error is explicit and actionable. - New query string parameter on `/api/companies/:id/adapter-models` — older clients that omit it still work (parameter is optional and defaults to null). ## Model Used - OpenAI GPT-5.4 (reasoning effort: high) via Codex CLI - Provider: OpenAI - Used to author the code changes in this PR ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [ ] I have updated relevant documentation to reflect my changes — N/A - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge |
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15eac43b43 |
[codex] Retry max-turn exhausted heartbeats (#5096)
## Thinking Path > - Paperclip orchestrates AI agents for autonomous companies, and heartbeat execution is the control-plane loop that keeps assigned work moving. > - Max-turn exhaustion is a recoverable local-adapter stop condition for Claude and Gemini agents when a run needs another heartbeat to continue safely. > - The previous behavior could leave max-turn continuation details hard to inspect, and duplicate/stale continuation wakes could keep running after issue state changed. > - The adapter layer also needed to avoid trusting arbitrary stdout/stderr text as scheduler control metadata. > - This pull request adds bounded max-turn continuation scheduling, visible retry state, structured stop metadata handling, and stale/duplicate continuation guards. > - The benefit is safer automatic continuation after max-turn stops, clearer operator visibility, and fewer duplicate or stale agent runs. ## What Changed - Replaces closed PR #4952, whose head repository was deleted. - Rebases the recovered max-turn continuation branch onto current `paperclipai/paperclip:master`. - Adds max-turn continuation scheduling and retry-state plumbing for heartbeat runs. - Adds stale/duplicate continuation suppression when issue status, ownership, or execution locks change. - Normalizes Claude/Gemini max-turn detection around structured stop metadata instead of unstructured stdout/stderr text. - Surfaces max-turn continuation settings and retry visibility in the board UI. - Adds focused server, adapter, and UI tests for max-turn stop metadata, retry scheduling, stale queued-run invalidation, adapter parsing/execution, run ledger display, and agent config patching. ## Verification - `pnpm install --no-frozen-lockfile` to refresh local dependencies after rebasing onto current `master`. - `pnpm run preflight:workspace-links && pnpm exec vitest run server/src/__tests__/claude-local-adapter.test.ts server/src/__tests__/claude-local-execute.test.ts server/src/__tests__/gemini-local-adapter.test.ts server/src/__tests__/gemini-local-execute.test.ts server/src/__tests__/heartbeat-retry-scheduling.test.ts server/src/__tests__/heartbeat-stale-queue-invalidation.test.ts server/src/services/heartbeat-stop-metadata.test.ts ui/src/components/IssueRunLedger.test.tsx ui/src/lib/agent-config-patch.test.ts ui/src/lib/runRetryState.test.ts --testTimeout=20000` - `pnpm --filter @paperclipai/adapter-claude-local typecheck && pnpm --filter @paperclipai/adapter-gemini-local typecheck && pnpm --filter @paperclipai/server typecheck && pnpm --filter @paperclipai/ui typecheck` - UI screenshot note: the UI changes are limited to config/ledger state rendering rather than layout changes; component/unit coverage above verifies the rendered behavior. ## Risks - Medium behavior risk: heartbeat retry gating now suppresses max-turn continuations when issue state or execution locks drift, so any callers that relied on stale continuations running will now see cancellation instead. - Low adapter risk: Claude/Gemini unstructured text no longer triggers max-turn scheduler metadata, so only structured stop signals and Gemini exit code 53 are trusted. - No database migrations. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent, GPT-5-class model, tool-enabled local repository editing and command execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots (not applicable: state/default rendering only; covered by component/unit tests) - [x] I have updated relevant documentation to reflect my changes (not applicable: no user-facing command or docs contract changed) - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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57229d0f24 |
[codex] Add issue monitor liveness controls (#4988)
## Thinking Path > - Paperclip is a control plane for autonomous AI companies where work must stay observable, governable, and recoverable. > - The task/heartbeat subsystem owns agent execution continuity, issue state transitions, and visible recovery behavior. > - Waiting on an external service is not the same as being blocked when the assignee still owns a future check. > - The gap was that agents had no first-class one-shot monitor state for external-service waits, so recovery could look stalled or require ad hoc comments. > - This pull request adds bounded issue monitors that can wake the owner, clear exhausted waits, and produce explicit recovery behavior. > - It also surfaces monitor status in the board UI and documents when to use monitors versus `blocked`. > - The benefit is clearer liveness semantics for asynchronous waits without weakening single-assignee task ownership. ## What Changed - Added issue monitor fields, shared types, validators, constants, and an idempotent `0075` migration for scheduled monitor state. - Added server-side monitor scheduling, dispatch, recovery bounds, activity logging, and external-ref redaction. - Added board/agent route coverage for monitor permissions and child monitor scheduling. - Added issue detail/property UI for monitor state, a monitor activity card, and Storybook stories for review surfaces. - Documented monitor semantics and recovery policy behavior in `doc/execution-semantics.md`. - Addressed Greptile review feedback by preserving monitor state in skipped-stage builders and making board monitor saves send `scheduledBy: "board"`. ## Verification - `pnpm install --frozen-lockfile` - `pnpm run preflight:workspace-links && pnpm exec vitest run server/src/__tests__/issue-execution-policy-routes.test.ts server/src/__tests__/issue-execution-policy.test.ts server/src/__tests__/issue-monitor-scheduler.test.ts server/src/__tests__/recovery-classifiers.test.ts ui/src/components/IssueMonitorActivityCard.test.tsx ui/src/components/IssueProperties.test.tsx ui/src/lib/activity-format.test.ts` - First run passed 5 files and failed to collect 2 server suites because the worktree was missing the optional `acpx/runtime` dependency. - After `pnpm install --frozen-lockfile`, reran the 2 failed suites successfully. - `pnpm exec vitest run server/src/__tests__/issue-monitor-scheduler.test.ts server/src/__tests__/recovery-classifiers.test.ts` - `pnpm --filter @paperclipai/shared typecheck && pnpm --filter @paperclipai/db typecheck && pnpm --filter @paperclipai/server typecheck && pnpm --filter @paperclipai/ui typecheck` - `pnpm exec vitest run server/src/__tests__/issue-execution-policy.test.ts ui/src/components/IssueProperties.test.tsx` - `pnpm --filter @paperclipai/server typecheck && pnpm --filter @paperclipai/ui typecheck` - `pnpm exec vitest run ui/src/components/IssueMonitorActivityCard.test.tsx ui/src/components/IssueProperties.test.tsx` - `pnpm --filter @paperclipai/ui typecheck` - Storybook screenshot captured from `http://127.0.0.1:6006/iframe.html?viewMode=story&id=product-issue-monitor-surfaces--monitor-surfaces` with Playwright. ## Screenshots  ## Risks - Medium: this changes heartbeat recovery behavior for scheduled external-service waits, so regressions could affect wake timing or recovery issue creation. - Migration risk is reduced by using `IF NOT EXISTS` for the new issue monitor columns and index. - External monitor references are treated as secret-adjacent and are intentionally omitted from visible activity/wake payloads. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent with repository tool use and terminal execution. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots or Storybook review surfaces - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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76f09c8eb6 |
[PAP-3180] Move workspace switcher into sidebar (#4981)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies. > - The board UI needs a clear persistent way to move between company workspaces. > - The previous layout kept company switching in a separate left rail, which made the sidebar feel split between workspace selection and navigation. > - The workspace switcher belongs in the sidebar header so navigation and workspace context stay together. > - This pull request removes the separate company rail from the layout and turns the sidebar company menu into the primary workspace switcher. > - The benefit is a cleaner sidebar structure that keeps workspace identity, switching, company actions, and navigation in one place. ## What Changed - Removed the standalone `CompanyRail` from the main layout. - Added the company/workspace switcher to the default, company settings, and instance settings sidebars. - Expanded `SidebarCompanyMenu` to list active workspaces, indicate the current workspace, navigate out of instance settings when switching, and expose add-company onboarding. - Updated focused component tests for the new workspace-switcher behavior. ## Verification - `pnpm --filter @paperclipai/ui exec vitest run src/components/SidebarCompanyMenu.test.tsx src/components/CompanySettingsSidebar.test.tsx` - `pnpm --filter @paperclipai/ui typecheck` - `git diff --check` - Visual smoke attempted against the managed dev server at `http://127.0.0.1:57385`; a fresh browser context reached the authenticated sign-in screen, so I could not capture an authenticated sidebar screenshot from this heartbeat. ## Risks - Low-to-medium UI risk: this changes the primary sidebar structure and workspace-switching entry point. - The instance-settings switch behavior now routes back to the selected company dashboard when a workspace is selected. - No migrations, API contracts, or lockfile changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-enabled, medium reasoning mode. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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fe401b7fa9 |
[codex] Polish inbox nested issue UI (#4959)
## Thinking Path > - Paperclip orchestrates AI agents through issue lists and issue-thread interactions > - The inbox must preserve nested issue visibility and keyboard navigation as work decomposes into deeper sub-issues > - Some UI polish issues made nested rows harder to scan and pending question cancellation less covered > - The issue list also had a small test indentation regression around load-more behavior > - This pull request tightens nested inbox rendering and related issue-thread/list polish > - The benefit is a more reliable operator inbox for multi-level work trees ## What Changed - Included nested grandchild issues in inbox keyboard navigation and recursive row rendering. - Sort parent rows by descendant activity so active subtrees remain visible. - Removed extra inbox card background styling in favor of the page surface. - Added regression coverage for pending question cancellation. - Cleaned up the issue-list load-more test indentation. ## Verification - `pnpm exec vitest run ui/src/lib/inbox.test.ts ui/src/components/IssueChatThread.test.tsx ui/src/components/IssuesList.test.tsx` - Screenshots were not captured in this PR split; the visible flow is covered by focused component/helper tests and should get browser QA in the follow-up issue. ## Risks - Medium risk: nested inbox rendering and keyboard navigation are user-visible. The changes are localized to inbox grouping/rendering helpers and covered by targeted tests. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool use and local command execution. Exact context window was not exposed in the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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2d72292ad6 |
[codex] Add workspace routine run tab (#4958)
## Thinking Path > - Paperclip orchestrates AI agents through reusable execution workspaces and routines > - Operators need a fast way to run workspace-aware routines against a specific execution workspace > - The existing workspace detail surface showed configuration, runtime logs, and linked issues, but not routines that depend on workspace variables > - Routine runs also needed to prefill the selected execution workspace so branch variables resolve correctly > - This pull request adds a workspace routines tab and prefilled routine-run dialog support > - The benefit is a tighter workflow for rerunning reviews, smoke checks, and other workspace-specific routines ## What Changed - Added an execution workspace `Routines` tab and company-prefixed routes. - Listed routines that declare or reference workspace-specific variables. - Added `Run now` support that preselects the current execution workspace in `RoutineRunVariablesDialog`. - Centralized reusable execution workspace ordering/deduplication for issue creation and workspace cards. - Added focused UI helper and dialog regression tests. ## Verification - `pnpm exec vitest run ui/src/lib/reusable-execution-workspaces.test.ts ui/src/lib/workspace-routines.test.ts ui/src/components/RoutineRunVariablesDialog.test.tsx ui/src/lib/company-routes.test.ts` - Screenshots were not captured in this PR split; the visible flow is covered by focused component/helper tests and should get browser QA in the follow-up issue. ## Risks - Medium risk: this adds a new workspace detail tab and routine-run path. It is isolated to workspace-scoped routines and uses existing routine run APIs. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool use and local command execution. Exact context window was not exposed in the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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3cd26a78fc |
[codex] Surface live run comment context (#4957)
## Thinking Path > - Paperclip orchestrates AI agents through issue comments and heartbeat runs > - The board UI needs to distinguish a comment that triggered a live run from comments queued after that run started > - The run payload already stores comment context, but active-run API responses did not expose the ids the UI needs > - Without those ids, the triggering comment can flash as queued while the agent is already responding to it > - This pull request exposes live-run comment context and teaches the optimistic comment helper to ignore the trigger comment > - The benefit is clearer issue-chat state during comment-triggered agent interruptions ## What Changed - Added `contextCommentId` and `contextWakeCommentId` to active/live run payloads. - Threaded those ids through server routes, heartbeat summaries, UI API types, and issue detail rendering. - Updated optimistic comment classification to avoid marking the triggering comment as queued. - Added server and UI regression coverage. ## Verification - `pnpm exec vitest run server/src/__tests__/agent-live-run-routes.test.ts ui/src/lib/optimistic-issue-comments.test.ts` ## Risks - Low-to-medium risk: adds optional fields to existing run payloads. Existing consumers should ignore unknown fields, and UI handling is null-safe. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool use and local command execution. Exact context window was not exposed in the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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e8275318ba |
[codex] Raise agent heartbeat concurrency default (#4954)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Agent heartbeat settings control how much parallel work one employee can run > - The previous default of 5 concurrent runs was too restrictive for active local agent teams > - The shared default, heartbeat clamp, docs, and route/import/UI expectations need to agree > - This pull request raises the default heartbeat concurrency to 20 while keeping explicit headroom up to 50 for power users > - The benefit is higher throughput for agent teams without each new agent needing manual runtime config edits ## What Changed - Raised `AGENT_DEFAULT_MAX_CONCURRENT_RUNS` from 5 to 20. - Raised the heartbeat service max clamp from 10 to 50, keeping the new default below the ceiling. - Updated V1 implementation docs and tests that assert default imported/exported runtime config. - Updated the new-agent UI runtime config test to assert the shared default constant instead of duplicating the numeric value. ## Verification - `pnpm exec vitest run server/src/__tests__/agent-permissions-routes.test.ts server/src/__tests__/company-portability.test.ts ui/src/lib/new-agent-runtime-config.test.ts` ## Risks - Medium risk: new agents can consume more local execution capacity by default. The heartbeat scheduler still respects configured max concurrency and budget/pause controls, and operators can lower or raise the per-agent cap within the `1..50` clamp. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool use and local command execution. Exact context window was not exposed in the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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4272c1604d |
Add ACPX local adapter runtime (#4893)
## Thinking Path > - Paperclip orchestrates AI-agent companies through a control plane that can start, supervise, and recover agent runs. > - Local adapters are the bridge between Paperclip issues and concrete agent runtimes such as Claude, Codex, and other ACP-compatible tools. > - The roadmap calls out broader “bring your own agent” and claw-style agent support, and ACPX gives Paperclip one path to normalize multiple ACP agents behind a single adapter. > - The branch needed to become one reviewable PR against current `paperclipai/paperclip:master`, without carrying stale base conflicts or generated lockfile churn. > - This pull request adds an experimental built-in `acpx_local` adapter, integrates it through the server/CLI/UI adapter surfaces, and adds regression coverage for runtime execution, skill sync, stream parsing, diagnostics, and log redaction. > - The benefit is that Paperclip can run Claude/Codex/custom ACP agents through ACPX while keeping operator configuration, skills, logging, and transcript rendering inside the existing adapter model. ## What Changed - Added `@paperclipai/adapter-acpx-local` with server execution, config schema, ACPX session handling, CLI formatting, UI config helpers, and stdout parsing. - Registered `acpx_local` across CLI, server, shared constants, UI adapter metadata, adapter capabilities, and agent creation/editing surfaces. - Added ACPX runtime execution support with persistent sessions, local-agent JWT environment handling, skill snapshots, runtime skill materialization, and isolation/security regressions. - Added ACPX adapter diagnostics and marked the adapter experimental in the UI. - Added command/env secret redaction for resolved command metadata in adapter-utils, server event storage, and the Agent Detail invocation UI. - Added Storybook coverage for ACPX config, transcript rendering, and skill states, plus PR screenshots under `docs/pr-screenshots/pap-2944/`. - Rebased the branch onto current `public-gh/master`; `pnpm-lock.yaml` is intentionally not included and there are no migration/schema changes. ## Verification - `pnpm exec vitest run packages/adapters/acpx-local/src/server/execute.test.ts packages/adapters/acpx-local/src/server/test.test.ts packages/adapters/acpx-local/src/cli/format-event.test.ts packages/adapters/acpx-local/src/ui/parse-stdout.test.ts packages/adapter-utils/src/server-utils.test.ts server/src/__tests__/redaction.test.ts server/src/__tests__/acpx-local-execute.test.ts server/src/__tests__/acpx-local-skill-sync.test.ts server/src/__tests__/acpx-local-adapter-environment.test.ts server/src/__tests__/adapter-routes.test.ts server/src/__tests__/agent-skills-routes.test.ts ui/src/adapters/metadata.test.ts` — 12 files, 87 tests passed. - `pnpm --filter @paperclipai/adapter-acpx-local typecheck` — passed. - `pnpm --filter @paperclipai/server typecheck` — passed. - `pnpm --filter @paperclipai/ui typecheck` — passed. - Confirmed PR diff does not include `pnpm-lock.yaml`, database schema files, or migrations. Screenshots:    ## Risks - Medium risk: this introduces a new built-in adapter package and touches runtime execution, adapter registration, agent config, skills, and transcript rendering. - ACPX and ACP agent behavior can vary by installed tool versions; the adapter is marked experimental to set operator expectations. - `pnpm-lock.yaml` is excluded per repository PR policy, so dependency lock refresh must be handled by the repo’s automation or maintainers. - No database migration risk: no schema or migration files changed. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent based on GPT-5, with repository tool use, shell execution, git operations, and local verification. Exact hosted context window was not exposed in this environment. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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a3de1d764d |
Add cheap model profiles for local adapters (#4881)
## Thinking Path > - Paperclip is a control plane for autonomous AI companies, where adapters are the boundary between the board, agents, and execution runtimes. > - Local adapters currently expose a primary runtime configuration, but operators often need a cheaper model lane for routine or low-risk work. > - That cheap lane has to stay adapter-owned: runtime profile settings should not mutate the primary adapter config or bypass existing auth/secret mediation. > - Issue creation also needs an ergonomic way to request primary, cheap, or custom model behavior for a selected assignee. > - This pull request adds a first-class `cheap` model profile contract across adapter capabilities, heartbeat config resolution, agent configuration, and issue creation. > - The benefit is cheaper task execution can be configured and requested explicitly while preserving adapter boundaries, secret handling, and audit visibility. ## What Changed - Added adapter model-profile capability metadata and a `cheap` profile contract for supported local adapters. - Applied `runtimeConfig.modelProfiles.cheap.adapterConfig` during heartbeat config resolution, including requested/applied/fallback run metadata. - Added agent configuration UI for cheap model profile settings without writing those settings into primary `adapterConfig`. - Added New Issue assignee model lane controls for Primary / Cheap / Custom and request payload handling. - Added run ledger profile badges and Storybook stories for the new cheap-lane UI states. - Added tests for validators, heartbeat model profile application, permission/secret mediation, UI payload helpers, and run ledger rendering. - Added committed UI verification screenshots under `docs/pr-screenshots/pap-2837/`. - Addressed Greptile review feedback around cheap-profile defaults, shared profile types, and fallback test data. ## Verification Local: - `pnpm exec vitest run packages/shared/src/validators/issue.test.ts server/src/__tests__/adapter-registry.test.ts server/src/__tests__/agent-permissions-routes.test.ts server/src/__tests__/heartbeat-model-profile.test.ts ui/src/components/IssueRunLedger.test.tsx ui/src/lib/agent-config-patch.test.ts ui/src/lib/issue-assignee-overrides.test.ts ui/src/lib/new-agent-runtime-config.test.ts` — passed, 8 files / 103 tests. - `pnpm exec vitest run ui/src/lib/new-agent-runtime-config.test.ts ui/src/components/IssueRunLedger.test.tsx` — passed after Greptile/rebase follow-up, 2 files / 17 tests. - `pnpm --filter @paperclipai/ui typecheck` — passed after Greptile/rebase follow-up. - `pnpm -r typecheck` — passed. - `pnpm build` — passed. - `pnpm test:run` — did not complete successfully in this local worktree: it stopped in pre-existing `@paperclipai/adapter-utils` sandbox/SSH fixture suites outside this PR diff. Failures were 5s local timeouts plus `git init -b` unsupported by this machine's Git 2.21.0. The branch-specific targeted suites above passed. - Branch was fetched/rebased onto `public-gh/master`; `git rev-list --left-right --count public-gh/master...HEAD` reports `0 9`. Remote PR checks on latest head `e30bf399146451c86cee98ed528d51d33fa5af5a`: - `policy` — passed. - `verify` — passed. - `e2e` — passed. - `Greptile Review` — passed, confidence score 5/5; Greptile review threads resolved. - `security/snyk (cryppadotta)` — passed. Screenshots: - [New issue cheap lane desktop](https://github.com/paperclipai/paperclip/blob/PAP-2837-plan-cheap-model-for-adapters-that-can-support-it/docs/pr-screenshots/pap-2837/newissue-cheap-desktop.png) - [New issue custom lane desktop](https://github.com/paperclipai/paperclip/blob/PAP-2837-plan-cheap-model-for-adapters-that-can-support-it/docs/pr-screenshots/pap-2837/newissue-custom-desktop.png) - [New issue unsupported adapter desktop](https://github.com/paperclipai/paperclip/blob/PAP-2837-plan-cheap-model-for-adapters-that-can-support-it/docs/pr-screenshots/pap-2837/newissue-unsupported-desktop.png) - [Run ledger model profile badges desktop](https://github.com/paperclipai/paperclip/blob/PAP-2837-plan-cheap-model-for-adapters-that-can-support-it/docs/pr-screenshots/pap-2837/runledger-profile-badges-desktop.png) - Mobile variants are also in `docs/pr-screenshots/pap-2837/`. ## Risks - Medium: heartbeat config mediation now merges runtime model profiles into adapter configs, so adapter secret normalization and host-command restrictions must keep covering nested config paths. - Medium: the UI adds another issue creation choice; unsupported adapters must keep hiding the cheap lane and preserve primary behavior. - Low migration risk: no database migration is included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used OpenAI Codex coding agent using GPT-5-class reasoning with repo tool use and command execution. Exact served model/context window was not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [ ] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com> |
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1fe1067361 |
Polish board settings and skills workflow (#4863)
## Thinking Path > - Paperclip's board UI and bundled skills are the operator layer for configuring agents, routines, issue workflows, and local troubleshooting loops. > - The prior rollup mixed this operator polish with database backups, backend reliability, thread scale, and cost/workflow primitives. > - This pull request isolates the remaining board QoL, settings, issue-detail integration, adapter config cleanup, and skills smoke tooling. > - It includes some integration-level overlap with the thread and workflow slices so this branch can run from `origin/master` while still preserving the full original work. > - Preferred merge order is the narrower primitives first, then this integration PR last. > - The benefit is that reviewers can inspect the user-facing board/settings/skills layer separately from backend infrastructure changes. ## What Changed - Added board/settings polish for agents, routines, company settings, project workspace detail, and issue detail controls. - Added agent/routine UI regression tests and New Issue dialog coverage. - Integrated issue-detail activity/cost/interaction surfaces and leaf work pause/resume controls. - Cleaned bundled adapter UI config defaults and onboarding copy. - Added terminal-bench loop and work-stoppage diagnosis skills plus a smoke test script. - Updated attachment type handling and Paperclip skill/API guidance. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run ui/src/pages/Agents.test.tsx ui/src/pages/Routines.test.tsx ui/src/components/NewIssueDialog.test.tsx ui/src/pages/IssueDetail.test.tsx server/src/__tests__/costs-service.test.ts server/src/__tests__/issue-thread-interaction-routes.test.ts server/src/__tests__/issue-thread-interactions-service.test.ts` - Result: 7 test files passed, 54 tests passed. - `pnpm run smoke:terminal-bench-loop-skill` - Result: JSON output included `"ok": true` and `"cleanup": true`. - UI screenshots not included because verification is focused component/page coverage for the changed board surfaces. ## Risks - This is the integration-heavy PR in the split and intentionally overlaps some component/API primitives with the issue-thread and workflow PRs so it can run from `origin/master`. - Preferred merge order: #4859, #4860, #4861, #4862, then this PR last. If earlier branches merge first, this PR may need a straightforward conflict refresh in shared UI files. - The terminal-bench smoke script creates temporary mock issues and relies on cleanup; the verified run returned `cleanup: true`. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5.5, code execution and GitHub CLI tool use, medium reasoning effort. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c4269bab59 |
Add workflow interaction cancellation and issue cost summaries (#4862)
## Thinking Path > - Paperclip coordinates work through issue-thread interactions, run history, and cost telemetry. > - Operators need workflow prompts to be cancellable and costs to be visible at the issue level. > - The earlier rollup mixed this workflow/cost work with database backups, reliability recovery, thread scaling, and settings polish. > - This pull request isolates the interaction and cost surfaces into a reviewable slice. > - The backend now supports cancelling pending question interactions and summarizing issue-tree costs. > - The UI component layer can render cancelled questions and interleave activity with run ledger rows. ## What Changed - Added `cancelled` as an issue-thread interaction status and result shape for question interactions. - Added the board-only `POST /issues/:id/interactions/:interactionId/cancel` route and service implementation. - Added issue-tree cost summary support in the cost service and `/issues/:id/cost-summary` API route. - Extended shared cost exports and UI API/query keys for issue cost summaries. - Updated `IssueThreadInteractionCard` and `IssueRunLedger` components for cancelled questions, issue cost surfaces, and activity/run interleaving. - Added focused server and component regression coverage. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run server/src/__tests__/costs-service.test.ts server/src/__tests__/issue-thread-interaction-routes.test.ts server/src/__tests__/issue-thread-interactions-service.test.ts ui/src/components/IssueRunLedger.test.tsx` - Result: 4 test files passed, 45 tests passed. - UI screenshots not included because this PR updates reusable components and API surfaces without wiring a new page-level layout. ## Risks - Adds a new interaction terminal status; clients that switch exhaustively on interaction status may need to handle `cancelled`. - Issue-tree cost summaries use recursive issue traversal and should be watched on unusually large issue trees. - Page-level issue detail wiring is intentionally left to the board QoL/issue-detail branch to keep this PR narrow. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5.5, code execution and GitHub CLI tool use, medium reasoning effort. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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87f19cd9a6 |
Improve issue thread scale and markdown polish (#4861)
## Thinking Path > - Paperclip's board UI is the operator surface for supervising AI-agent companies. > - Issue threads are where operators read progress, respond to agents, inspect markdown, and jump through long histories. > - Large threads and rich markdown had become difficult to navigate and expensive to render. > - The previous rollup mixed these UI scale fixes with unrelated backend recovery, costs, backups, and settings changes. > - This pull request isolates the issue-thread scale and markdown polish work. > - The benefit is a reviewable UI slice that can merge independently of the backend reliability, database backup, workflow, and board QoL PRs. ## What Changed - Virtualized long issue chat threads and stabilized anchor/jump-to-latest behavior for large histories. - Added incremental issue-list row loading and tests for scroll-triggered pagination behavior. - Hardened markdown body rendering and markdown editor behavior around HTML tags, image drops, code-copy UI, and escaped newline handling. - Added a long-thread measurement harness at `scripts/measure-issue-chat-long-thread.mjs` plus `perf:issue-chat-long-thread`. - Added focused UI/lib regression coverage for thread rendering, markdown, optimistic comments, and message building. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run ui/src/components/IssueChatThread.test.tsx ui/src/components/IssuesList.test.tsx ui/src/components/MarkdownBody.test.tsx ui/src/components/MarkdownEditor.test.tsx ui/src/lib/issue-chat-messages.test.ts ui/src/lib/optimistic-issue-comments.test.ts` - Result: 6 test files passed, 170 tests passed. - UI screenshots not included because this PR is covered by targeted component tests and does not introduce a new page layout. ## Risks - Virtualization changes can affect scroll anchoring in edge cases on very long threads. - Markdown/editor hardening changes are intentionally defensive, but malformed content may render differently than before. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5.5, code execution and GitHub CLI tool use, medium reasoning effort. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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cd606563f6 |
Expand database backups to non-system schemas (#4859)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies. > - Reliable backups are part of operating that control plane safely. > - The previous backup path was public-schema oriented and did not clearly cover plugin-owned schemas or migration history. > - Paperclip now has plugin database namespaces and Drizzle migration state that must survive backup/restore. > - This pull request expands logical database backups to non-system schemas and documents the backup boundary. > - The benefit is safer restore behavior for core and plugin-owned database state without implying full filesystem disaster recovery. ## What Changed - Include non-system database schemas in JavaScript and pg_dump backup paths. - Preserve enum, table, sequence, index, constraint, migration, and plugin-schema objects across backup/restore. - Add restore coverage for plugin-owned schemas and Drizzle migration history. - Clarify docs that DB backups are logical database backups, not full instance filesystem backups. ## Verification - `pnpm install --frozen-lockfile` - `pnpm exec vitest run packages/db/src/backup-lib.test.ts` - Result: 1 test file passed, 4 tests passed. - Confirmed this PR does not include `pnpm-lock.yaml` or `.github/workflows/*` changes. ## Risks - Medium: backup generation touches schema discovery and restore ordering, so unusual database objects may need additional coverage later. - No migrations are included. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool use enabled, medium reasoning effort. Exact hosted context-window details are not exposed in this runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge Note: no UI changes are included in this PR, so screenshots are not applicable. --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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c0ce35d1fb |
Improve E2B plugin configuration UX and fix execution timeouts (#4802)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - E2B is a sandbox provider plugin that runs agent code in isolated cloud environments > - Operators configure E2B through the plugin settings page > - But the E2B API key configuration was unclear — the settings field description didn't explain that pasted keys are auto-saved as company secrets, and the fallback to the host `E2B_API_KEY` variable wasn't documented > - Additionally, long-running E2B sandbox commands were timing out because the plugin environment RPC driver used a fixed timeout, and environment commands competed for the single foreground command slot > - This PR clarifies the E2B configuration UX, fixes RPC timeouts for plugin environment execution, and runs E2B environment commands in background mode to avoid blocking the foreground slot > - The benefit is clearer E2B setup for operators and more reliable sandbox command execution ## What Changed - Updated E2B plugin manifest and settings UI to clarify API key configuration — field description now explains that pasted keys are saved as company secrets and documents the `E2B_API_KEY` host fallback - Added test coverage for the plugin settings page rendering - Fixed `plugin-environment-driver.ts` to pass the configured timeout through to RPC calls instead of using a hardcoded default - Updated `environment-runtime.ts` to propagate timeout from the environment lease to the plugin driver - Changed E2B sandbox command execution to use background handles so long-running agent commands don't block the foreground slot needed by the callback bridge ## Verification - `pnpm test` — all existing and new tests pass - `pnpm typecheck` — clean - Manual: navigate to plugin settings, verify E2B API key field shows the updated description text - Manual: run an E2B-backed agent task with a long-running command, verify it completes without RPC timeout ## Risks - Low risk. Configuration UX change is cosmetic. The timeout fix passes an existing value through instead of dropping it. Background command execution is a behavioral change but only affects E2B sandbox commands — the foreground slot is still available for bridge health checks. ## Model Used Codex GPT 5.4 high via Paperclip. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge |
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9b99d30330 |
Add dedicated environment settings page and test-in-environment (#4798)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - Agents run inside environments (local, SSH, E2B sandbox) > - Operators need to configure and manage these environments > - But environment settings were buried inside the general company settings page, making them hard to find > - Additionally, when testing an agent from the configuration form, the test always ran locally regardless of which environment was selected > - This PR moves environments into a dedicated top-level company settings section and wires the "Test Environment" button to run inside the selected environment > - The benefit is operators can find and manage environments more easily, and the test button now validates the actual environment the agent will use ## What Changed - Added a dedicated `CompanyEnvironments` settings page with its own route and sidebar entry - Updated `CompanySettingsSidebar` and `CompanySettingsNav` to include the new environments section - Modified the agent test route (`POST /agents/:id/test`) to accept an optional `environmentId` parameter - Updated all adapter `test.ts` handlers to resolve and use the specified execution target environment - Added `resolveTestExecutionTarget` to `execution-target.ts` for remote environment test resolution with cwd fallback - Moved the "Test Environment" button and its feedback display into the `NewAgent` page footer for better UX flow ## Verification - `pnpm test` — all existing and new tests pass - `pnpm typecheck` — clean - Manual: navigate to Company Settings, confirm "Environments" appears as a top-level section - Manual: configure an agent with a non-local environment, click "Test Environment", confirm the test runs inside that environment ## Risks - Low risk. UI-only routing change for the settings page. The test-in-environment change adds an optional parameter with a local fallback, so existing behavior is preserved when no environment is specified. ## Model Used Codex GPT 5.4 high via Paperclip. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge |
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6b7f6ce4b8 |
[codex] Split PR #4692 UI/QoL updates (#4701)
## Thinking Path > - Paperclip orchestrates AI agents through a company-scoped control plane. > - The affected surface is the board UI for issue threads, issue lists, routines, dialogs, navigation, and issue review indicators. > - Closed PR #4692 bundled backend, schema, docs, workflow, and UI/QoL work into one oversized change set. > - Greptile could not keep reviewing that broad PR because it exceeded the 100-file review limit and mixed unrelated concerns. > - This pull request extracts the UI/QoL slice into a fresh branch under the review limit while leaving workflow and lockfile churn out. > - The benefit is a focused review path for the board UI performance and workflow improvements without reopening the oversized PR. ## What Changed - Added long issue-thread virtualization, scroll-container binding, anchor preservation, latest-comment jump targeting, and related regression/perf fixtures. - Improved issue list scalability with scroll-based loading, server offset parameters, and pagination-focused UI tests. - Reduced new issue dialog typing churn and split dialog action subscriptions so broad layout/nav surfaces avoid unnecessary renders. - Added routine variables help and routine description mention options for users, agents, and projects. - Added productivity review badge/link UI and fixed the badge to use Paperclip's company-prefixed router link. - Kept the split PR below Greptile's review limit and excluded `.github/workflows/pr.yml` and `pnpm-lock.yaml`. ## Verification - `pnpm install --no-frozen-lockfile` in the clean worktree to install `@tanstack/react-virtual` locally without committing lockfile churn. - `pnpm --filter @paperclipai/ui exec vitest run --config vitest.config.ts src/components/IssueChatThread.test.tsx src/components/IssuesList.test.tsx src/components/NewIssueDialog.test.tsx src/pages/Routines.test.tsx src/pages/Issues.test.tsx` passed: 5 files, 83 tests. - `pnpm --filter @paperclipai/ui typecheck` passed. - `git diff --check origin/master..HEAD` passed. - Split-scope checks: 53 changed files; no `.github/workflows/pr.yml`; no `pnpm-lock.yaml`. - Screenshots were not captured in this heartbeat; the changes are primarily virtualization, routing, pagination, and editor behavior covered by focused regression tests. ## Risks - Moderate UI risk because issue-thread virtualization changes scroll behavior on long conversations; regression tests cover anchor jumps, latest-comment targeting, row metadata, and short-thread fallback. - Moderate integration risk because the issue-list offset parameter and productivity review field depend on matching API behavior. - Dependency risk: the UI package adds `@tanstack/react-virtual` while repository policy keeps `pnpm-lock.yaml` out of PRs, so CI must resolve dependency changes through the repo's normal lockfile policy. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-enabled local repository and GitHub workflow. Exact runtime context window was not exposed by the harness. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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1991ec9d6f |
[codex] Split backend control-plane QoL slice (#4700)
## Thinking Path > - Paperclip is the control plane for autonomous AI companies, so backend task ownership, recovery, review visibility, and company-scoped limits need to stay enforceable without UI-only coupling. > - Closed PR #4692 bundled those backend changes with UI workflow, docs, skills, workflow, and lockfile churn. > - PAP-2694 asks for a clean backend/control-plane slice from that closed branch. > - This branch starts from current `master` and mines only the `cli`, `packages/db`, `packages/shared`, and `server` contracts/tests needed for the backend behavior. > - It explicitly excludes UI workflow/performance work, `.github/workflows/pr.yml`, `pnpm-lock.yaml`, docs, skills, package-script, adapter UI build-config, and perf fixture script changes; the only UI files are fixture/test updates required by the tightened shared `Company` contract. > - The benefit is a smaller reviewable PR that preserves the control-plane fixes while staying under Greptile s 100-file review limit. ## What Changed - Added company-scoped attachment-size limits through DB schema/migrations, shared company portability contracts, CLI import/export coverage, and server attachment upload enforcement. - Added productivity review service/API behavior for no-comment streak, long-active, and high-churn review issues, including request-depth clamping and issue summary exposure. - Hardened issue ownership and recovery/control-plane paths: peer-agent mutation denial, issue tree pause/resume behavior, stranded recovery origins, and related activity/test coverage. - Preserved related backend contract updates for routine timestamp variables and managed agent instruction bundles because they live in shared/server contracts from the source branch. - Addressed Greptile feedback by making `Company.attachmentMaxBytes` non-optional, simplifying review request-depth clamping, fixing the migration final newline, and enforcing the process-level attachment cap as the final ceiling for uploads. - Added minimal company fixtures needed for repo-wide typecheck/build and kept the PR to 66 changed files with forbidden/non-slice paths excluded. ## Verification - `pnpm install --frozen-lockfile` - `git diff --check origin/master..HEAD` - `git diff --name-only origin/master..HEAD | wc -l` -> 66 files - `git diff --name-only origin/master..HEAD -- .github/workflows/pr.yml pnpm-lock.yaml package.json doc skills .agents scripts packages/adapters` -> no output - `pnpm exec vitest run --config vitest.config.ts packages/shared/src/validators/issue.test.ts packages/shared/src/routine-variables.test.ts packages/shared/src/adapter-types.test.ts cli/src/__tests__/company-import-export-e2e.test.ts cli/src/__tests__/company.test.ts server/src/__tests__/productivity-review-service.test.ts server/src/__tests__/issue-tree-control-service.test.ts server/src/__tests__/issue-tree-control-routes.test.ts server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts server/src/__tests__/issue-attachment-routes.test.ts server/src/__tests__/heartbeat-process-recovery.test.ts server/src/__tests__/issues-service.test.ts` -> 12 files, 147 tests passed - `pnpm exec vitest run --config vitest.config.ts cli/src/__tests__/company-delete.test.ts cli/src/__tests__/company-import-export-e2e.test.ts server/src/__tests__/productivity-review-service.test.ts` -> 3 files, 18 tests passed - `pnpm exec vitest run --config vitest.config.ts server/src/__tests__/issue-attachment-routes.test.ts` -> 1 file, 6 tests passed - `pnpm --filter @paperclipai/db typecheck && pnpm --filter @paperclipai/shared typecheck && pnpm --filter @paperclipai/server typecheck && pnpm --filter paperclipai typecheck` - `pnpm --filter @paperclipai/server typecheck` - `pnpm --filter @paperclipai/ui typecheck && pnpm --filter @paperclipai/ui build` ## Risks - Includes migrations `0073_shiny_salo.sql` and `0074_striped_genesis.sql`; merge ordering matters if another PR adds migrations first. - This is intentionally backend-only apart from fixture/test updates forced by shared type correctness; UI affordances from PR #4692 are not present here and should land in separate UI slices. - The worktree install emitted plugin SDK bin-link warnings for unbuilt plugin packages, but the targeted tests and package typechecks completed successfully. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected; check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-enabled terminal/GitHub workflow. Exact runtime context window was not exposed by the harness. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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d0bdbe11a9 |
Stabilize inline selector keyboard handling (#4617)
## Thinking Path > - Paperclip's board UI relies on compact selectors for frequent issue and agent edits. > - Inline selectors often live inside larger keyboard-aware surfaces such as composers and popovers. > - Arrow, enter, tab, and escape keys handled by the selector should not leak to parent document shortcuts. > - Stale company selection should also stay hidden until the company list confirms it is valid. > - This pull request tightens inline selector keyboard handling and adds regression coverage for stale company bootstrap behavior. > - The benefit is fewer accidental parent interactions and safer company-scoped UI initialization. ## What Changed - Added a stable empty `recentOptionIds` default so selector filtering does not get a new array every render. - Mirrored highlighted option state into a ref so Enter/Tab commits the current highlighted option reliably after keyboard navigation. - Stopped propagation for selector-owned navigation/commit/escape keys. - Added jsdom regressions for inline selector keyboard handling and CompanyProvider stale selection behavior. ## Verification - `pnpm exec vitest run ui/src/components/InlineEntitySelector.test.tsx ui/src/context/CompanyContext.test.tsx` - Targeted selector and CompanyProvider tests pass cleanly without React `act(...)` warnings. - Screenshots not attached: this is keyboard/state behavior covered by component tests. ## Risks - Low risk: changes are scoped to inline selector key handling and tests. The main behavior shift is intentionally preventing handled selector keys from reaching parent listeners. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent based on GPT-5, tool-enabled local repository and shell access, Paperclip heartbeat context. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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43b0f2ae58 |
Add pause and resume actions to sidebar agents (#4616)
## Thinking Path > - Paperclip operators need fast control over the agents running their company. > - The sidebar is the persistent place operators scan agent state while navigating the board UI. > - Agent pause and resume already exist as control-plane actions, but sidebar users had to navigate away to use them. > - This pull request adds a compact per-agent action menu in the sidebar. > - It keeps edit, pause, and resume close to the visible agent list while preserving existing navigation behavior. > - The benefit is faster operator intervention when an agent needs to be paused or restarted. ## What Changed - Refactored sidebar agent rows into a small item component with a hover/focus action menu. - Added edit, pause, and resume actions using existing agent API calls and cache invalidation keys. - Added success/error toasts for pause and resume mutations. - Tracked pause/resume pending state per agent so one active mutation does not disable every sidebar row. - Disabled direct sidebar resume for budget-paused agents and labeled that state clearly. - Added jsdom coverage for active-agent pause, paused-agent resume, per-agent pending state, and budget-paused resume protection. - Added visual review artifacts for the default row and opened action menu: - [Sidebar row](docs/pr-screenshots/pr-4616/sidebar-agent-row.png) - [Sidebar action menu](docs/pr-screenshots/pr-4616/sidebar-agent-actions.png) ## Verification - `pnpm exec vitest run ui/src/components/SidebarAgents.test.tsx` - `pnpm --filter @paperclipai/server prepare:ui-dist` - Browser screenshot pass against a temporary local trusted instance at `http://127.0.0.1:3102` using Playwright. ## Risks - Low risk: UI-only addition using existing agent pause/resume endpoints. The main risk is layout crowding for very narrow sidebars, mitigated by the icon-only trigger and existing truncation. - Budget-paused agents now require a non-sidebar path to resume, which is intentional to avoid accidentally restarting agents stopped by budget enforcement. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex coding agent based on GPT-5, tool-enabled local repository and shell/browser access, Paperclip heartbeat context. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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d95968a9f8 |
[codex] Ignore stale stored company selections (#4602)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The board UI is the operator’s control surface for selecting the active company > - A company id stored in localStorage can become stale across resets, imports, or deleted companies > - Exposing that stale id before companies load can briefly put downstream UI in an invalid company scope > - This pull request defers selected-company exposure until the loaded company list validates the stored id > - The benefit is a cleaner company-selection bootstrap path and fewer transient invalid API requests ## What Changed - Initialized `CompanyProvider` selection as `null` until companies finish loading. - Reused a stored company id only when it exists in the loaded selectable company list. - Cleared storage and selected state when no companies are available. - Added jsdom regression coverage for stale stored ids before and after company loading. ## Verification - `pnpm exec vitest run --project @paperclipai/ui ui/src/context/CompanyContext.test.tsx` ## Risks - Low risk. The change only affects selection bootstrap and keeps valid stored selections intact. - There may be a slightly longer initial `null` selected-company state while the company list is loading. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-enabled terminal/GitHub workflow, reasoning mode active. Context window not exposed in this environment. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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53396f272a |
[codex] Fix sub-issue progress summary styling (#4588)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - The issue list and issue detail surfaces summarize child/sub-issue progress for operators. > - Those summaries need to be compact and visually consistent because they appear in dense lists. > - The progress strip is most useful when there are multiple sub-issues to compare, so the summary intentionally stays hidden for a single sub-issue. > - This pull request tightens the sub-issue progress summary styling and updates the related tests. > - The benefit is a cleaner, more scannable task list without changing task ownership, status, or workflow behavior. ## What Changed - Adjusted sub-issue progress summary copy/styling in the issue list and detail summary helpers. - Intentionally render the progress summary only for two or more child issues; a single child issue still appears in the normal sub-issue list without a redundant progress strip. - Updated the UI tests that assert the rendered summary behavior. - Clarified the two-plus-child threshold in code with a named constant. ## Verification - `pnpm exec vitest run --project @paperclipai/ui ui/src/components/IssuesList.test.tsx ui/src/lib/issue-detail-subissues.test.ts` ## Screenshots  ## Risks - Low risk; this is a small UI presentation change with focused test coverage. - The intentional threshold change means parents with exactly one child no longer show the aggregate progress strip, avoiding redundant summary chrome while keeping the child visible in the list. - No schema or API behavior changes. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, `gpt-5`, coding model with tool use and local command execution; context window not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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fda296ee4f |
[codex] Add configurable liveness auto-recovery controls (#4587)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Heartbeat liveness recovery decides when stalled issue trees need manager-visible follow-up. > - Automatic recovery issue creation is useful, but operators need instance-level controls for how aggressive it is. > - Without controls, recovery behavior is harder to tune for local development, production operations, and noisy edge cases. > - This pull request adds configurable liveness auto-recovery settings across shared contracts, API routes, services, and the instance experimental settings UI. > - The benefit is that operators can keep liveness findings advisory or enable bounded recovery automation with explicit intervals and lookback windows. ## What Changed - Added shared types and validators for liveness auto-recovery settings. - Extended instance settings routes and services to persist and validate the new controls. - Wired heartbeat/recovery services to honor enablement, minimum interval, and lookback settings. - Added UI controls for liveness recovery under instance experimental settings. - Covered the new server behavior with instance settings and liveness escalation tests. ## Verification - `pnpm exec vitest run --project @paperclipai/server server/src/__tests__/heartbeat-issue-liveness-escalation.test.ts server/src/__tests__/instance-settings-routes.test.ts --pool=forks --poolOptions.forks.isolate=true` - `pnpm --filter @paperclipai/shared typecheck` - `pnpm --filter @paperclipai/server typecheck` - `pnpm --filter @paperclipai/ui typecheck` ## Risks - Moderate behavioral risk because recovery automation timing changes when enabled; defaults keep existing advisory behavior unless the setting is turned on. - No database migration in this PR; settings are stored through the existing instance settings path. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, `gpt-5`, coding model with tool use and local command execution; context window not exposed by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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82e257c7ba |
Cancel stale queued heartbeats when issue graph changes (PAP-2314) (#4534)
Co-Authored-By: Paperclip <noreply@paperclip.ing> |
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8145141c55 |
Fix external issue URL rewriting in markdown (#4558)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Issue and comment rendering is part of the board UI where humans supervise and inspect agent work. > - External Paperclip issue URLs can appear in comments as references to other runs, review threads, or remote test environments. > - Those links must preserve their full destination, including origin, port, and `#comment-...` fragments, or the operator is taken to the wrong place. > - The bug here was that absolute `http(s)` issue URLs were being normalized into internal `/issues/...` routes in the markdown path. > - This pull request stops rewriting absolute URLs while keeping internal issue-reference behavior for relative paths and identifiers. > - The benefit is that authored external links now navigate exactly where the operator expects, especially for remote test and comment-deep-link workflows. ## What Changed - Stopped `ui/src/lib/issue-reference.ts` from treating absolute `http(s)` URLs as internal issue paths. - Added defense-in-depth in `ui/src/lib/mention-chips.ts` so absolute `http(s)` URLs are never reclassified as issue mention chips. - Updated `ui/src/lib/issue-reference.test.ts` to cover absolute Paperclip URLs with preserved origin, port, and comment hash. - Updated `ui/src/components/MarkdownBody.test.tsx` to assert the reported URL renders as an external link, not an internal `/issues/...` href. ## Verification - `pnpm exec vitest run ui/src/lib/issue-reference.test.ts ui/src/components/MarkdownBody.test.tsx` - Expected result: `2` files passed, `37` tests passed. - Manual spot-check from the issue report path: a URL like `http://remote.example.test:3103/PAPA/issues/PAPA-115#comment-...` should remain an external link with its full destination preserved. ## Risks - Low risk. The change narrows when Paperclip rewrites URLs, so the main risk is if some existing workflow depended on absolute `http(s)` Paperclip URLs being converted into internal issue links. The added regression coverage is aimed at preventing that from regressing silently. ## Model Used - OpenAI Codex local agent via Paperclip `codex_local` - Backing model family: GPT-5-based Codex runtime - Exact backend model ID/version: not exposed by this adapter/runtime surface - Context window: not exposed by this adapter/runtime surface - Capabilities used: tool use, shell command execution, code editing, git operations, and local test execution ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [ ] I will address all Greptile and reviewer comments before requesting merge |
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54ab0d24cd |
Fix disappearing issue comments (#4557)
## Thinking Path > - Paperclip is a control plane for AI-agent companies, so issue detail pages are a primary surface for understanding agent work and human feedback. > - The relevant subsystem here is the issue comments/chat experience across the React issue detail page and the server comment pagination API. > - Long issue threads were only surfacing the newest page of comments at first render, which hid earlier human and agent messages behind extra pagination. > - The first UI fix exposed that the descending cursor path on the server could also fail for older-page fetches, leaving the chat tab stuck on an infinite "Loading earlier comments..." state. > - This needed to be addressed in both layers so the chat tab can surface earlier conversation history without manual recovery and without server errors. > - This pull request auto-loads earlier comment pages in the issue detail chat view and fixes the descending cursor predicate used by issue comment pagination. > - The benefit is that long-running issues like `PAPA-103` now show the missing conversation history near the top of the chat surface instead of hiding it or failing to load it. ## What Changed - Auto-load earlier issue comment pages in the issue detail chat tab until the thread reaches a 150-comment cap or there are no older comments left. - Add UI-side guard logic and regression coverage for optimistic issue comment pagination so the autoload behavior stops cleanly. - Replace the raw SQL descending cursor predicate in `issueService.listComments` with typed Drizzle comparisons for the `(createdAt, id)` anchor tuple. - Add a server regression test that paginates earlier comments in descending order from an anchor comment. - Smoke-test the exact previously failing seeded `PAPA-103` cursor path on the isolated dev instance used for review. ## Verification - `pnpm --filter @paperclipai/server exec vitest run src/__tests__/issues-service.test.ts` - `pnpm --filter @paperclipai/server typecheck` - Manual smoke against seeded `PAPA-103` data on the isolated dev server: - `GET /api/issues/PAPA-103/comments?order=desc&limit=50` returns `200` - `GET /api/issues/PAPA-103/comments?after=765d3609-edc6-4d11-a8fe-d466affbe85d&order=desc&limit=50` now returns `200` with 50 comments instead of `500` ## Risks - Moderate UI/perf risk on very large threads because the chat tab now prefetches multiple earlier pages on mount; the cap is intentionally limited to 150 comments to bound that work. - Low API risk because the server fix only changes the cursor predicate construction for anchor-based comment pagination, but any mistake there would affect older-comment paging order. > I checked `ROADMAP.md` before opening this PR and this bug fix does not duplicate planned core work. ## Model Used - OpenAI Codex coding agent in the Paperclip local adapter environment. The exact backend model ID and context window were not exposed in-session. Tool-assisted workflow included shell execution, git/GitHub CLI, local test execution, and targeted code edits. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [ ] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge |
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df425fde96 |
Present ordered sub-issues as a workflow checklist (#4523)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies. > - Operators use issue detail pages and child issue lists to understand multi-step execution plans. > - Ordered sub-issues currently read like a flat table, so dependency chains and current next steps are harder to scan. > - The branch work adds a workflow-oriented presentation for child issues without changing the single-assignee task model. > - This pull request makes ordered sub-issues read more like a progress checklist while preserving normal issue list controls. > - The benefit is that operators can see completed steps, active work, blocked follow-ups, and dependency order at a glance. ## What Changed - Added workflow sorting utilities and tests for dependency-aware child issue ordering. - Added sub-issue progress summary, checklist numbering, current-step affordances, blocker context, and done-state de-emphasis in the issue list UI. - Wired issue detail sub-issue panels to use the workflow sort/progress checklist presentation. - Updated issue service behavior/tests for child issue ordering inputs used by the UI. - Added a Storybook visual review fixture and screenshot helper for the sub-issue workflow checklist surface. ## Verification - `pnpm run preflight:workspace-links && pnpm exec vitest run server/src/__tests__/issues-service.test.ts ui/src/components/IssueRow.test.tsx ui/src/components/IssuesList.test.tsx ui/src/pages/IssueDetail.test.tsx ui/src/lib/issue-detail-subissues.test.ts ui/src/lib/workflow-sort.test.ts` - Result: 6 test files passed, 55 tests passed, 34 embedded Postgres issue-service tests skipped because `@embedded-postgres/darwin-x64` is unavailable on this host. - Visual review: generated Storybook screenshots from the existing local Storybook server on port 6006 with `node scripts/screenshot-subissues.mjs /tmp/pap-2189-subissues-screens http://localhost:6006`. - Screenshot artifacts: - Desktop dark:  - Desktop light:  - Mobile dark:  - Mobile light:  - Local Storybook note: starting a second Storybook process selected port 6008 because 6006 was occupied, then Vite failed with an esbuild host/binary version mismatch (`0.25.12` host vs `0.27.3` binary). The already-running Storybook server on 6006 served the fixture successfully for screenshots. ## Risks - Medium UI risk: the issue list now has additional sub-issue-specific visual states, so dense lists should be checked for spacing and scanability. - Low ordering risk: workflow sorting is covered by focused unit tests, but unusual dependency topologies may still need reviewer attention. - No migration risk: this PR does not add database migrations or touch `pnpm-lock.yaml`. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-enabled shell/git/GitHub workflow. Context window is runtime-provided and not exposed in this environment. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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5bd0f578fd |
Generalize sandbox provider core for plugin-only providers (#4449)
## Thinking Path > - Paperclip is a control plane, so optional execution providers should sit at the plugin edge instead of hardcoding provider-specific behavior into core shared/server/ui layers. > - Sandbox environments are already first-class, and the fake provider proves the built-in path; the remaining gap was that real providers still leaked provider-specific config and runtime assumptions into core. > - That coupling showed up in config normalization, secret persistence, capabilities reporting, lease reconstruction, and the board UI form fields. > - As long as core knew about those provider-shaped details, shipping a provider as a pure third-party plugin meant every new provider would still require host changes. > - This pull request generalizes the sandbox provider seam around schema-driven plugin metadata and generic secret-ref handling. > - The runtime and UI now consume provider metadata generically, so core only special-cases the built-in fake provider while third-party providers can live entirely in plugins. ## What Changed - Added generic sandbox-provider capability metadata so plugin-backed providers can expose `configSchema` through shared environment support and the environments capabilities API. - Reworked sandbox config normalization/persistence/runtime resolution to handle schema-declared secret-ref fields generically, storing them as Paperclip secrets and resolving them for probe/execute/release flows. - Generalized plugin sandbox runtime handling so provider validation, reusable-lease matching, lease reconstruction, and plugin worker calls all operate on provider-agnostic config instead of provider-shaped branches. - Replaced hardcoded sandbox provider form fields in Company Settings with schema-driven rendering and blocked agent environment selection from the built-in fake provider. - Added regression coverage for the generic seam across shared support helpers plus environment config, probe, routes, runtime, and sandbox-provider runtime tests. ## Verification - `pnpm vitest --run packages/shared/src/environment-support.test.ts server/src/__tests__/environment-config.test.ts server/src/__tests__/environment-probe.test.ts server/src/__tests__/environment-routes.test.ts server/src/__tests__/environment-runtime.test.ts server/src/__tests__/sandbox-provider-runtime.test.ts` - `pnpm -r typecheck` ## Risks - Plugin sandbox providers now depend more heavily on accurate `configSchema` declarations; incorrect schemas can misclassify secret-bearing fields or omit required config. - Reusable lease matching is now metadata-driven for plugin-backed providers, so providers that fail to persist stable metadata may reprovision instead of resuming an existing lease. - The UI form is now fully schema-driven for plugin-backed sandbox providers; provider manifests without good defaults or descriptions may produce a rougher operator experience. ## Model Used - OpenAI Codex via `codex_local` - Model ID: `gpt-5.4` - Reasoning effort: `high` - Context window observed in runtime session metadata: `258400` tokens - Capabilities used: terminal tool execution, git, and local code/test inspection ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [ ] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge |
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f68e9caa9a |
Polish markdown external link wrapping (#4447)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The board UI renders agent comments, PR links, issue links, and operational markdown throughout issue threads > - Long GitHub and external links can wrap awkwardly, leaving icons orphaned from the text they describe > - Small inbox visual polish also helps repeated board scanning without changing behavior > - This pull request glues markdown link icons to adjacent link characters and removes a redundant inbox list border > - The benefit is cleaner, more stable markdown and inbox rendering for day-to-day operator review ## What Changed - Added an external-link indicator for external markdown links. - Kept the GitHub icon attached to the first link character so it does not wrap onto a separate line. - Kept the external-link icon attached to the final link character so it does not wrap away from the URL/text. - Added markdown rendering regressions for GitHub and external link icon wrapping. - Removed the extra border around the inbox list card. ## Verification - `pnpm exec vitest run --project @paperclipai/ui ui/src/components/MarkdownBody.test.tsx` - `pnpm --filter @paperclipai/ui typecheck` ## Risks - Low risk. The markdown change is limited to link child rendering and preserves existing href/target/rel behavior. - Visual-only inbox polish. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-enabled with shell/GitHub/Paperclip API access. Context window was not reported by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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73fbdf36db |
Gate stale-run watchdog decisions by board access (#4446)
## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The run ledger surfaces stale-run watchdog evaluation issues and recovery actions > - Viewer-level board users should be able to inspect status without getting controls that the server will reject > - The UI also needs enough board-access context to know when to hide those decision actions > - This pull request exposes board memberships in the current board access snapshot and gates watchdog action controls for known viewer contexts > - The benefit is clearer least-privilege UI behavior around recovery controls ## What Changed - Included memberships in `/api/cli-auth/me` so the board UI can distinguish active viewer memberships from operator/admin access. - Added the stale-run evaluation issue assignee to output silence summaries. - Hid stale-run watchdog decision buttons for known non-owner viewer contexts. - Surfaced watchdog decision failures through toast and inline error text. - Threaded `companyId` through the issue activity run ledger so access checks are company-scoped. - Added IssueRunLedger coverage for non-owner viewers. ## Verification - `pnpm exec vitest run --project @paperclipai/ui ui/src/components/IssueRunLedger.test.tsx` - `pnpm --filter @paperclipai/server typecheck` - `pnpm --filter @paperclipai/ui typecheck` ## Risks - Medium-low risk. This is a UI gating change backed by existing server authorization. - Local implicit and instance-admin board contexts continue to show watchdog decision controls. - No migrations. > For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and discuss it in `#dev` before opening the PR. Feature PRs that overlap with planned core work may need to be redirected — check the roadmap first. See `CONTRIBUTING.md`. ## Model Used - OpenAI Codex, GPT-5 coding agent, tool-enabled with shell/GitHub/Paperclip API access. Context window was not reported by the runtime. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge --------- Co-authored-by: Paperclip <noreply@paperclip.ing> |
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5a0c1979cf | [codex] Add runtime lifecycle recovery and live issue visibility (#4419) |