33 Commits

Author SHA1 Message Date
Dotta ece8a51e22 [codex] Bundle local branch fixes from PAP-10032 (#6604)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - This branch accumulated multiple already-tested control-plane,
adapter runtime, invite, workspace, plugin, and UI quality fixes on the
primary Paperclip checkout.
> - `origin/master` advanced while those commits were still local, so
the branch needed to be preserved and reconciled before review.
> - Splitting the branch commit-by-commit against the new base produced
overlapping conflicts with recently merged upstream PRs.
> - This pull request keeps the remaining branch as one standalone PR
because the final diff is 38 files after removing screenshot artifacts,
under Greptile's 100-file cap, and can be merged independently after
review.
> - The benefit is that none of the local work is lost, the branch is
now based on current `origin/master`, and reviewers can evaluate the
reconciled changes in one place.

## What Changed

- Merged the local accumulated branch with current `origin/master` and
resolved the invite-flow overlaps from the newer upstream companies
query helper.
- Preserved the local fixes for invite existing-member behavior, invite
link copy fallback, reusable workspace selection, worktree auth, static
SPA fallback, markdown wrapping, plugin slot registration, cloud
upstream UX/server polish, project sorting, and related tests.
- Removed screenshot artifacts from the PR per review request.
- Kept the PR under the requested file limit: 38 files changed, with no
`pnpm-lock.yaml` or `.github/workflows/*` changes.

## Verification

- `NODE_ENV=test pnpm exec vitest run
ui/src/pages/CompanyInvites.test.tsx ui/src/pages/InviteLanding.test.tsx
ui/src/pages/Projects.test.tsx ui/src/plugins/slots.test.ts
ui/src/components/MarkdownBody.test.tsx
server/src/__tests__/invite-accept-existing-member.test.ts
server/src/__tests__/static-index-html.test.ts
server/src/__tests__/execution-workspaces-service.test.ts
server/src/__tests__/better-auth.test.ts
server/src/__tests__/worktree-config.test.ts`
- `NODE_ENV=test pnpm --filter @paperclipai/ui typecheck`
- `NODE_ENV=test pnpm --filter @paperclipai/server typecheck`
- Confirmed `git diff --name-only origin/master...HEAD | wc -l` is `38`.
- Confirmed no PR diff entries match `pnpm-lock.yaml`,
`.github/workflows/*`, or `screenshots/*`.

## Risks

- Medium review risk because this is a bundled rescue PR rather than
several narrow feature PRs.
- Invite flow and company cache behavior overlapped with newer upstream
changes; the merge resolution intentionally keeps the shared
`companiesListQueryOptions` helper while preserving local
existing-member invite behavior.
- Visual review evidence is no longer attached in-repo because
screenshots were removed from this PR per review request.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5-based coding agent, with repository tool access,
terminal execution, and git/GitHub CLI operations.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] UI screenshots were intentionally removed from this PR per review
request
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
Co-authored-by: Claude Opus 4.7 <noreply@anthropic.com>
Co-authored-by: CodexCoder <codexcoder@paperclip.local>
2026-05-25 07:25:26 -05:00
Dotta a1835cfa5e [codex] Harden plugin runtime invocation scope (#6547)
## Thinking Path

> - Paperclip orchestrates AI-agent companies through a company-scoped
control plane.
> - Plugins extend that control plane, but plugin workers still call
back into host APIs.
> - Those worker-to-host calls need the same company boundary guarantees
as normal API routes.
> - Plugin action handlers also need authenticated actor context from
the host instead of trusting caller-supplied params.
> - This pull request hardens plugin bridge/action scope and keeps
plugin operation issues out of normal issue surfaces.
> - The benefit is safer plugin execution with clearer authorization
boundaries and better test coverage.

## What Changed

- Added host-owned invocation context plumbing for nested plugin worker
calls.
- Added actor context to plugin `performAction` calls and test harness
helpers.
- Enforced company invocation scope on worker-to-host calls and filtered
company lists to the active invocation scope.
- Extended plugin action route tests for board and agent actor context,
spoofed company params, and cross-company rejection.
- Extended plugin worker manager coverage for invocation-scope
propagation.
- Filtered typed and legacy plugin operation issue origins from default
issue/inbox lists.

## Verification

- `pnpm --filter @paperclipai/plugin-sdk build`
- `NODE_ENV=test pnpm exec vitest run
packages/plugins/sdk/tests/host-client-factory.test.ts
packages/plugins/sdk/tests/testing-actions.test.ts
server/src/__tests__/plugin-routes-authz.test.ts
server/src/__tests__/plugin-worker-manager.test.ts
server/src/__tests__/issues-service.test.ts`

Note: embedded Postgres issue-service tests reported host-level Postgres
init skip for 47 tests; the non-embedded targeted tests passed.

## Risks

- Medium: plugin host authorization paths are sensitive, and external
plugins may rely on previously loose company params.
- Mitigation: the change only tightens calls when the host attached a
company invocation scope and includes explicit tests for board, agent,
and nested worker calls.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI GPT-5 Codex via `codex_local`, tool-enabled coding session;
exact context window not exposed by this runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-05-22 09:16:24 -05:00
Dotta 38c185fb8b [codex] Add agent permissions and controls plan (#6386)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies by keeping
task ownership, approvals, and operator control inside one control
plane.
> - Agent permissions and plugin-hosted company settings sit on the
boundary between autonomy and governance.
> - V1 needs scoped task assignment rules, plugin extension points, and
clearer company access surfaces without weakening company boundaries.
> - The branch builds the core authorization service, plugin SDK/host
APIs, and UI simplifications needed to support those controls.
> - Paperclip EE plugin surfaces were intentionally moved out of this
core PR per review direction, so this PR now carries only the public
core/plugin infrastructure work.
> - The latest updates preserve the PAP-9937 branch changes that belong
in this PR, remove the `design/` artifacts, and exclude the experimental
`plugin-briefs` package.
> - Greptile feedback was applied through the authorization/audit paths
and the final cleanup commit was re-reviewed at 5/5 with no unresolved
Greptile threads.
> - The benefit is safer assignment control with extension hooks for
richer permission products while preserving simple defaults for normal
operators.

## What Changed

- Added scoped task-assignment authorization decisions and routed
issue/agent assignment mutations through the authorization service.
- Added plugin SDK and host APIs for company settings slots,
authorization policy/grant management, assignment previews, and bridge
invocation scope propagation.
- Simplified core company access UI and moved advanced controls behind
plugin-provided settings surfaces.
- Added retry-now affordances for blocked issue next-step notices.
- Added protected-assignment enforcement for persisted
agent/project/issue policies, including explicit-grant fallback
behavior.
- Added incremental principal-access compatibility backfill for active
agent memberships and role-default human permission grants.
- Added the Markdown code block wrap action fix from the latest branch
changes.
- Removed `design/` artifacts from the PR and removed
`packages/plugins/plugin-briefs` from the final diff.
- Addressed Greptile feedback for plugin actor sanitization, legacy
membership handling, audit pagination, unknown grant-scope metadata, and
startup test mocks.

## Verification

- `pnpm exec vitest run server/src/__tests__/access-service.test.ts
server/src/__tests__/company-portability.test.ts` -> 2 files passed, 54
tests passed.
- `pnpm exec vitest run
server/src/__tests__/server-startup-feedback-export.test.ts
server/src/__tests__/access-service.test.ts
server/src/__tests__/company-portability.test.ts` -> 3 files passed, 62
tests passed.
- `pnpm exec vitest run
server/src/__tests__/authorization-service.test.ts
server/src/__tests__/plugin-access-authorization-host-services.test.ts
server/src/__tests__/server-startup-feedback-export.test.ts` -> 3 files
passed, 28 tests passed.
- `pnpm --filter @paperclipai/server typecheck` -> passed.
- `git diff --check` -> passed.
- `node ./scripts/check-docker-deps-stage.mjs` -> passed.
- `CI=true pnpm install --frozen-lockfile --ignore-scripts` -> passed
with no lockfile update.
- `pnpm exec vitest run
ui/src/components/MarkdownBody.interaction.test.tsx` -> 1 test passed.
- `git ls-files design packages/plugins/plugin-briefs | wc -l` -> 0.
- GitHub CI on `40cd83b53` -> all checks passed, merge state `CLEAN`.
- Greptile on `40cd83b53` -> 5/5, 102 files reviewed, 0
comments/annotations added, 0 unresolved review threads.
- Confirmed the PR diff contains no `design/`,
`packages/plugins/plugin-briefs`, `pnpm-lock.yaml`, or
`.github/workflows` changes.

## Risks

- Medium: task assignment authorization paths are behaviorally stricter
for protected/private policy data, so existing plugin-authored policies
may block assignment until explicit grants or approval flows are
configured.
- Medium: plugin-host authorization APIs expand the surface area
available to trusted plugins and need careful review for company
scoping.
- Low: startup now performs a principal-access compatibility backfill,
but the migration and runtime backfill use conflict-tolerant inserts.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5 coding agent, tool-enabled workflow with shell,
git, and GitHub CLI access.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-22 08:12:52 -05:00
Dotta 5071c4c776 [codex] Add workspace diff viewer plugin (#6071)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - Operators need to inspect what agents changed inside execution and
project workspaces.
> - The existing workspace detail views did not provide a first-party
rich diff surface for staged, unstaged, head, renamed, binary,
oversized, and untracked changes.
> - The plugin system is the intended extension point for optional rich
UI surfaces.
> - This pull request adds a workspace diff plugin plus host services
and shared contracts so Changes tabs can render workspace diffs through
plugin slots.
> - The diff-renderer dependency should stay owned by the plugin package
rather than the core UI app.
> - The dependency surface must stay aligned with repository PR policy,
including intentionally omitting `pnpm-lock.yaml` from the PR.
> - The benefit is a more reviewable workspace surface without
hard-coding the renderer into every page.

## What Changed

- Added `@paperclipai/plugin-workspace-diff`, including diff
normalization, plugin manifest/worker/UI entrypoints, and focused plugin
tests.
- Kept `@pierre/diffs` scoped to `@paperclipai/plugin-workspace-diff`;
removed the core UI lab diff-renderer surface and direct UI package
dependency.
- Added shared workspace diff types and validators, plus plugin SDK
surface for workspace diff host services.
- Added server workspace diff service support and route coverage for
execution/project workspace diff flows.
- Wired Execution Workspace and Project Workspace Changes tabs to load
the diff plugin, including loading/error fallback behavior.
- Added UI tests and fixtures for the Changes tabs and plugin bridge
behavior.
- Added the new plugin package manifest to the Docker deps stage so PR
policy can validate dependency coverage.
- Addressed review hardening around empty untracked patches, workspace
path exposure, project workspace read capability checks, and default
base refs.

## Verification

- `pnpm --filter @paperclipai/plugin-workspace-diff test`
- `pnpm exec vitest run
packages/shared/src/validators/workspace-diff.test.ts
server/src/__tests__/workspace-diff-service.test.ts
ui/src/pages/ProjectWorkspaceDetail.test.tsx
ui/src/pages/ExecutionWorkspaceDetail.test.tsx`
- `pnpm exec vitest run ui/src/plugins/bridge.test.ts
server/src/__tests__/workspace-runtime-routes-authz.test.ts`
- `pnpm --filter @paperclipai/shared typecheck`
- `pnpm --filter @paperclipai/plugin-workspace-diff typecheck`
- `pnpm --filter @paperclipai/server typecheck`
- `pnpm --filter @paperclipai/ui typecheck`
- `node ./scripts/check-docker-deps-stage.mjs`
- Browser screenshot captured from the local worktree dev server:
https://files.catbox.moe/ofdpsp.png
- Confirmed branch is rebased onto `public-gh/master`,
`.github/workflows/pr.yml` is not included in the PR diff,
`ui/package.json` is not included in the PR diff, and `pnpm-lock.yaml`
is not included in the PR diff.

## Risks

- Medium UI integration risk: the Changes tab depends on the plugin slot
and host diff service path.
- Medium dependency risk: this adds `@pierre/diffs` in the plugin
package, but `pnpm-lock.yaml` is intentionally omitted per packaging
instructions because repository automation manages lockfile updates.
- Current CI blocker: downstream frozen installs fail until the
repository policy path for new plugin package dependencies is chosen.
- Diff rendering edge cases are covered for common working-tree and head
diff states, but very large repositories may still expose performance
limits.
- No migrations are included.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5 class coding model, tool-enabled local execution
environment. Exact context window was not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-18 08:50:06 -05:00
Dotta 03ad5c5bea [codex] Add issue document locking (#6009)
## Thinking Path

> - Paperclip orchestrates AI-agent companies through company-scoped
issues, comments, and issue documents.
> - Issue documents are the durable place where plans, handoffs, and
other work artifacts are revised over time.
> - Some documents need to be preserved as operator-approved snapshots
while agents continue working on the same issue.
> - Without document locking, a later board or agent write can overwrite
the document key that reviewers expected to remain stable.
> - This pull request adds board-managed issue document locks and makes
agent writes to locked keys create a derived document instead of
mutating the locked document.
> - The benefit is safer document handoffs: approved or frozen issue
documents stay immutable until the board explicitly unlocks them.

## What Changed

- Added `locked_at`, `locked_by_agent_id`, and `locked_by_user_id`
document fields plus migration `0085_tranquil_the_executioner.sql`.
- Added document lock/unlock service behavior, route endpoints, activity
events, and locked-document write protections.
- Made agent document writes to locked keys create a new derived key
such as `plan-2` rather than overwriting the locked document.
- Surfaced lock state through shared issue document types, UI API
methods, document header lock controls, and activity formatting.
- Added server and UI tests for lock/unlock behavior, locked document
immutability, and UI action visibility.
- Updated `doc/SPEC-implementation.md` with the V1 document lock
contract and endpoints.

## Verification

- `git rebase public-gh/master` completed cleanly after committing the
branch changes.
- `git diff --check` passed before commit.
- `pnpm run preflight:workspace-links && pnpm exec vitest run
server/src/__tests__/documents-service.test.ts
server/src/__tests__/issue-agent-mutation-ownership-routes.test.ts
ui/src/components/IssueDocumentsSection.test.tsx
ui/src/components/IssueContinuationHandoff.test.tsx
ui/src/lib/document-revisions.test.ts` passed: 5 files, 32 tests.

## Risks

- Medium risk because this changes the document persistence contract and
adds a migration.
- The migration uses `ADD COLUMN IF NOT EXISTS` and guarded foreign-key
creation so it remains safe for users who may have already applied an
earlier copy of the migration.
- Locked documents intentionally reject board edits/deletes/restores
until unlocked; any existing workflows that expected direct overwrite
need to unlock first.
- Agent writes to locked keys now create derived documents, which may
create extra issue documents when agents retry locked writes.

## Model Used

- OpenAI Codex coding agent based on GPT-5, with tool use and local code
execution in the Paperclip worktree.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-15 08:54:55 -05:00
Dotta b947a7d76c [codex] Improve local plugin development workflow (#5821)
## Thinking Path

> - Paperclip is the control plane for autonomous AI-agent companies.
> - Plugins are the extension point for adding capabilities without
expanding the core product surface.
> - Local plugin development needed a tighter CLI-first loop so plugin
authors can scaffold, run, install, inspect, and reload plugins without
reaching into internal package paths.
> - The server plugin install path also needed local-path handling that
keeps plugin identity, dashboard routes, and development watchers
coherent.
> - This pull request adds the CLI scaffold/install workflow, fixes the
server and SDK edge cases that blocked that loop, and updates the
agent-facing plugin creation skill and docs.
> - The benefit is that contributors can develop plugins from local
folders with a documented, repeatable happy path.

## What Changed

- Added `paperclipai plugin init` coverage and CLI wiring for local
plugin scaffolding.
- Improved local plugin install handling, plugin key route resolution,
dashboard capability behavior, and dev watcher startup/reload behavior.
- Fixed plugin SDK worker entrypoint validation for symlinked package
layouts.
- Added targeted tests for plugin init, server plugin authz/watcher
behavior, SDK worker host validation, and the authoring smoke example.
- Added a short local plugin development guide and refreshed the plugin
authoring guide plus `paperclip-create-plugin` skill instructions.

## Verification

- `pnpm run preflight:workspace-links && pnpm --filter
@paperclipai/plugin-sdk build && pnpm --filter
@paperclipai/create-paperclip-plugin typecheck && pnpm --filter
paperclipai typecheck && pnpm --filter @paperclipai/plugin-sdk typecheck
&& pnpm --filter @paperclipai/server typecheck`
- `pnpm exec vitest run --project paperclipai
cli/src/__tests__/plugin-init.test.ts`
- `pnpm exec vitest run --project @paperclipai/plugin-sdk
packages/plugins/sdk/tests/worker-rpc-host.test.ts`
- `pnpm exec vitest run --project @paperclipai/server
server/src/__tests__/plugin-dev-watcher.test.ts --pool=forks
--poolOptions.forks.isolate=true`
- `pnpm exec vitest run --project @paperclipai/server
server/src/__tests__/plugin-routes-authz.test.ts --pool=forks
--poolOptions.forks.isolate=true`
- `pnpm --dir packages/plugins/examples/plugin-authoring-smoke-example
test`
- Confirmed `pnpm-lock.yaml` is not included in the PR diff.

## Risks

- Medium risk: this touches plugin install routing, CLI command
behavior, and the local development watcher.
- Local path plugin installs execute trusted local code by design; the
new docs call out that trust boundary.
- No database migrations are included.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5 coding agent, tool-enabled local shell and git
workflow, medium reasoning effort. Context window details were not
exposed in this runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

UI screenshots: not applicable; this PR changes CLI/server/plugin docs
and tests, not board UI rendering.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-12 17:38:24 -05:00
Dotta 563413ecd4 Fix LLM wiki type contracts (#5758)
## Thinking Path

> - Paperclip is the control plane for autonomous AI companies, and
plugins extend that control plane without bloating core.
> - The LLM Wiki plugin adds a knowledge surface through the plugin
runtime and shared plugin UI components.
> - After the LLM Wiki work merged to `master`, CI exposed TypeScript
contract drift between plugin code, SDK component types, and update
settings types.
> - The ingestion settings update path intentionally accepts partial
source toggles, but its type intersected with the full settings shape
and required every source key.
> - The LLM Wiki UI also passes managed routine default-drift metadata
through the shared routine list item shape, but that metadata was
missing from the public item type.
> - This pull request narrows those type contracts to match the existing
runtime behavior.
> - The benefit is restoring typecheck on `master` with a small,
non-behavioral follow-up.

## What Changed

- Added a `WikiEventIngestionSettingsUpdate` type that permits partial
source updates without weakening normalized stored settings.
- Added managed routine default-drift metadata to the plugin SDK
`ManagedRoutinesListItem` type.
- Mirrored that managed routine default-drift type in the host UI
component item type.

## Verification

- `pnpm --filter @paperclipai/plugin-llm-wiki typecheck`
- `pnpm --filter @paperclipai/plugin-sdk typecheck`
- `pnpm --filter @paperclipai/ui typecheck`
- `git diff --check`

## Risks

- Low risk. This is a TypeScript type-contract fix only; no runtime
behavior or database schema changes.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5-based coding agent, tool-enabled local repository
editing and command execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

Notes on checklist applicability: no screenshots are included because
the UI change is a shared type-only contract update with no visual
behavior change; no docs were required because no behavior or commands
changed.

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-11 21:07:06 -05:00
Devin Foley 486fb88a15 Add Cloudflare sandbox provider plugin (#5687)
> _Stacked on top of #5685#5686. Diff against master includes commits
from earlier PRs in the stack — review focuses on the two new commits
(`Extend sandbox callback bridge for Worker-hosted plugins` + `Add
Cloudflare sandbox provider plugin`)._

## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies
> - Each agent runs in a sandbox environment, and operators choose which
provider backs that sandbox — today E2B and Daytona are bundled with the
platform
> - Cloudflare Workers + Durable Objects + the Sandbox SDK offer a
credible new option: globally distributed, cheap idle, and
operator-deployable as a single Worker
> - To plug it in, Paperclip needs (a) a provider plugin that speaks the
`PaperclipPluginManifestV1` lifecycle and (b) a small operator-deployed
Worker — the **bridge** — that adapts Paperclip's runtime RPCs to the
Cloudflare Sandbox SDK
> - The plugin extends the existing sandbox-callback-bridge with a
`bridge.transport: "worker"` discriminator so the platform routes
runtime RPCs through the Worker bridge instead of the in-process runner
> - This pull request adds the plugin, the bridge Worker template, and
the supporting adapter-utils + server hooks the new transport needs
> - The benefit is that operators can run sandboxes on Cloudflare's edge
with no new platform code beyond installing the plugin and deploying the
Worker

## What Changed

**Shared support (`Extend sandbox callback bridge for Worker-hosted
plugins`):**

- `packages/adapter-utils/src/sandbox-callback-bridge.{ts,test.ts}`:
expose `expectedHostHeader` so plugin-side bridge clients can verify the
canonical request envelope before forwarding.
- `packages/adapter-utils/src/command-managed-runtime.{ts,test.ts}`:
relax the always-fresh runner construction so callers can re-use a
runner across exec calls (Worker-hosted bridges hold the runner inside a
Durable Object).
- `server/src/services/environment-runtime.ts` +
`environment-runtime.test.ts`: route Worker-hosted bridges through the
same env-shaping path as E2B and pin the `requestEnv` contract.
- `server/src/services/plugin-environment-driver.ts`: thread an optional
`issueId` through the runtime descriptor so bridges can scope leases to
the originating issue (used by Cloudflare to map a sandbox to the
issue/workflow for billing and audit).
- `packages/plugins/sdk/src/protocol.ts`: add `issueId?` to
`PluginEnvironmentDriverBaseParams` and the new `bridge.transport:
"worker"` discriminator that the new plugin declares.
- `server/__tests__/heartbeat-plugin-environment.test.ts`: pin the
heartbeat path against the new runtime descriptor.

**The Cloudflare plugin itself (`Add Cloudflare sandbox provider
plugin`):**

- `packages/plugins/sandbox-providers/cloudflare/`: plugin entry,
manifest, plugin runtime (lifecycle + bridge client), config parsing,
and Vitest coverage. Manifest declares `bridge.transport: "worker"` so
the platform routes runtime RPCs through the bridge client.
- `bridge-template/`: a Worker template the operator deploys with
`wrangler`. Owns Durable Object-backed sessions (`sessions.ts`),
exec/stream routes (`exec.ts`, `routes.ts`), and an HMAC auth layer
(`auth.ts`) that pins the `Host` header surface. Includes the
SDK-contract-correct exec implementation, lease recovery, and chunked
stdout/stderr streaming.
- Tests cover lease/session handoff (`bridge-template/src/exec.test.ts`,
`routes.test.ts`), bridge client request shaping
(`src/bridge-client.test.ts`), and end-to-end plugin behavior
(`src/plugin.test.ts`) including streamed exec output. 27 tests in
total.
- `README.md` walks the operator through deploying the bridge Worker,
registering the plugin, and configuring the runtime.

## Verification

- `pnpm typecheck`
- `pnpm exec vitest run --no-coverage
packages/adapter-utils/src/sandbox-callback-bridge.test.ts
packages/adapter-utils/src/command-managed-runtime.test.ts
server/src/__tests__/environment-runtime.test.ts
server/src/__tests__/heartbeat-plugin-environment.test.ts`
- `(cd packages/plugins/sandbox-providers/cloudflare && pnpm test)` — 27
passing

For an operator-side smoke test:

1. Deploy the bridge: `cd
packages/plugins/sandbox-providers/cloudflare/bridge-template &&
wrangler deploy`
2. Register the plugin in your Paperclip instance, point its bridge URL
at the deployed Worker, set the HMAC shared secret.
3. Create a sandbox environment whose provider is `cloudflare`, then run
a Codex or Claude job against it.

## Risks

- Adds a new `bridge.transport: "worker"` code path, but the existing
E2B / Daytona transports go through the same shaped helpers and have
explicit test coverage that pins their behavior unchanged.
- The Worker bridge stores session state in a Durable Object; operator
instances must be aware of the corresponding Cloudflare costs (DO
requests, storage). Documented in the README.
- The `issueId` plumbing is optional throughout — existing plugins that
don't supply it continue to work.

## Model Used

- Provider: Anthropic
- Model: Claude Opus 4.7 (1M context)
- Capabilities used: extended reasoning, tool use (Read/Edit/Bash/Grep)

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots — N/A, no UI change
- [x] I have updated relevant documentation to reflect my changes
(plugin README, bridge-template README)
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-11 07:33:13 -07:00
Dotta 0096b56a1c [codex] Add LLM Wiki plugin host support (#5597)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - The plugin system needs host contracts and runtime support before
large plugins can integrate cleanly.
> - The source branch mixed the LLM Wiki package with supporting
host/runtime work, managed plugin skills, root-level storage spaces, and
a bookmarks reference plugin.
> - [PAP-9173](/PAP/issues/PAP-9173) asked for the current branch to be
split by file boundary: plugin package separately from everything else.
> - [PAP-9188](/PAP/issues/PAP-9188) clarified that LLM Wiki may have
plugin-local spaces, but Paperclip core should not reorganize top-level
local storage into spaces.
> - Follow-up review clarified that the bookmarks example should not
ship in this PR either.
> - This pull request contains the
non-`packages/plugins/plugin-llm-wiki/` host/runtime work, keeps runtime
state under the selected Paperclip instance root, and no longer includes
the bookmarks example.

## What Changed

- Added/updated plugin host contracts, SDK types, worker RPC plumbing,
managed plugin skill support, and related server tests.
- Removed the bookmarks example plugin package and its
bundled-example/workspace references.
- Removed the root-level local spaces CLI/migration surface and restored
instance-root runtime defaults for config, db, logs, storage, secrets,
workspaces, projects, and adapter homes.
- Replaced shared root `space-paths` helpers with `home-paths` helpers
for core runtime storage.
- Tightened stranded recovery unique-conflict detection so concurrent
recovery scans reuse the raced recovery issue when Postgres errors are
wrapped.
- Kept `packages/plugins/plugin-llm-wiki/` out of this PR diff;
plugin-local spaces remain in the stacked plugin-only PR.

## Verification

- `pnpm exec vitest run cli/src/__tests__/data-dir.test.ts
cli/src/__tests__/home-paths.test.ts cli/src/__tests__/onboard.test.ts
packages/shared/src/home-paths.test.ts
packages/db/src/runtime-config.test.ts
server/src/__tests__/agent-instructions-service.test.ts
server/src/__tests__/claude-local-execute.test.ts
server/src/__tests__/codex-local-execute.test.ts`
- `pnpm exec vitest run packages/db/src/runtime-config.test.ts`
- `pnpm exec vitest run
server/src/__tests__/plugin-routes-authz.test.ts`
- `pnpm --filter @paperclipai/server typecheck`
- `pnpm exec vitest run
server/src/__tests__/heartbeat-process-recovery.test.ts -t "reuses the
raced stranded recovery issue"` skipped locally because embedded
Postgres did not initialize on this macOS temp host; the code path was
typechecked and is covered by Linux CI.
- Boundary check: no core references remain for `PAPERCLIP_SPACE_ID`,
`spaces migrate-default`, `@paperclipai/shared/space-paths`,
`registerSpacesCommands`, or the removed bookmarks example.
- Previous PR head `4f23e034` had green GitHub checks: `verify`, all
four serialized server shards, `e2e`, `Canary Dry Run`, `policy`, Snyk,
and `Greptile Review`. Current head `582f466d` is re-running checks
after the bookmarks deletion.

## Risks

- Plugin host changes touch shared runtime paths, so regressions would
most likely appear in adapter startup, plugin loading, or local dev path
defaults.
- Removing the bookmarks example also removes one demonstration of
plugin database namespaces plus local-folder persistence; remaining
plugin examples still cover bundled example discovery and plugin host
flows.
- The plugin package itself is intentionally deferred to the stacked
plugin-only PR, where LLM Wiki plugin-local spaces live.
- Existing installs that tested the transient root-level spaces CLI
should stop using it; this PR intentionally removes that unsupported
migration surface before merge.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI GPT-5 Codex via Codex CLI, tool use and local code execution
enabled; context window not exposed.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass, except where noted above
for host-specific embedded Postgres initialization
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

Stacked follow-up: PR #5592 contains only
`packages/plugins/plugin-llm-wiki/` and targets this branch.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-10 07:34:12 -05:00
Dotta a1b30c9f35 Add planning mode for issue work (#5353)
## Thinking Path

> - Paperclip is a control plane for autonomous AI companies.
> - Issues are the core unit of work, and issue comments are how board
users and agents coordinate execution.
> - Some issue conversations need to produce plans and approvals instead
of immediate implementation work.
> - The existing issue contract did not distinguish standard execution
comments from planning-oriented issue work.
> - This pull request adds an issue work-mode contract and board UI
affordances for standard vs planning mode.
> - The benefit is that planning-mode issues can be created, displayed,
discussed, and carried through agent heartbeat context without losing
the normal issue workflow.

## What Changed

- Added `standard` / `planning` issue work-mode contracts across DB,
shared validators/types, server issue flows, plugin protocol, and
adapter heartbeat payloads.
- Added an idempotent `0081_optimal_dormammu` migration for
`issues.work_mode`, ordered after current `public-gh/master` migrations.
- Updated heartbeat/context summaries and issue-thread interaction
behavior so planning work mode is preserved when creating suggested
follow-up issues.
- Added UI support for planning-mode issue creation, issue rows, detail
composer styling, and composer work-mode toggles.
- Added focused server/shared/UI tests plus a Playwright visual
verification spec for planning-mode surfaces.
- Rebased the branch onto current `public-gh/master` and added durable
planning-mode screenshots under `doc/assets/pap-3368/`.

## Verification

- `pnpm --filter @paperclipai/db run check:migrations`
- `pnpm exec vitest run --project @paperclipai/shared
packages/shared/src/validators/issue.test.ts`
- `pnpm exec vitest run --project @paperclipai/server
server/src/__tests__/heartbeat-context-summary.test.ts
server/src/__tests__/issue-thread-interactions-service.test.ts
server/src/__tests__/issues-goal-context-routes.test.ts --pool=forks
--poolOptions.forks.isolate=true`
- `pnpm exec vitest run --project @paperclipai/ui
ui/src/components/IssueChatThread.test.tsx
ui/src/components/NewIssueDialog.test.tsx
ui/src/components/IssueRow.test.tsx ui/src/pages/IssueDetail.test.tsx`
- `pnpm exec vitest run --project @paperclipai/adapter-utils
packages/adapter-utils/src/server-utils.test.ts`
- `PAPERCLIP_E2E_SKIP_LLM=true npx playwright test --config
tests/e2e/playwright.config.ts
tests/e2e/planning-mode-visual-verification.spec.ts`

## Screenshots

Desktop planning detail:

![Desktop planning
detail](https://raw.githubusercontent.com/paperclipai/paperclip/PAP-3368-plan-a-planning-mode-for-issues/doc/assets/pap-3368/desktop-planning-detail.png)

Desktop planning row:

![Desktop planning
row](https://raw.githubusercontent.com/paperclipai/paperclip/PAP-3368-plan-a-planning-mode-for-issues/doc/assets/pap-3368/desktop-planning-row.png)

Desktop staged standard toggle:

![Desktop staged standard
toggle](https://raw.githubusercontent.com/paperclipai/paperclip/PAP-3368-plan-a-planning-mode-for-issues/doc/assets/pap-3368/desktop-standard-toggle.png)

Mobile planning detail:

![Mobile planning
detail](https://raw.githubusercontent.com/paperclipai/paperclip/PAP-3368-plan-a-planning-mode-for-issues/doc/assets/pap-3368/mobile-planning-detail.png)

Mobile planning row:

![Mobile planning
row](https://raw.githubusercontent.com/paperclipai/paperclip/PAP-3368-plan-a-planning-mode-for-issues/doc/assets/pap-3368/mobile-planning-row.png)

## Risks

- Medium migration risk: this adds a non-null issue column. The
migration uses `ADD COLUMN IF NOT EXISTS` so installations that applied
an older branch-local migration number can still apply the final
numbered migration safely.
- Medium contract risk: issue payloads, plugin payloads, and adapter
heartbeat payloads now include work mode; compatibility is handled by
defaulting missing values to `standard`.
- UI risk is moderate because composer controls changed; focused
component tests and visual e2e coverage exercise standard vs planning
display and toggle behavior.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5 coding agent in a local Paperclip worktree, with
shell/tool use. Exact context-window size is not exposed in this
runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-06 07:01:28 -05:00
Dotta 454edfe81e Add recovery handoff system notices (#5289)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - Agent runs can end productively while the source issue still lacks a
durable final disposition.
> - That leaves the control plane unsure whether to resume, escalate, or
close the work.
> - Issue comments also need a presentation contract so system-authored
recovery notices can render as first-class thread messages without
overloading normal comments.
> - This pull request adds successful-run handoff recovery, comment
presentation metadata, and system notice rendering.
> - The benefit is stricter task liveness with clearer operator-facing
recovery state.

## What Changed

- Added successful-run handoff decisions, wake payloads, escalation
behavior, and recovery tests.
- Added issue comment presentation metadata with migration
`0078_white_darwin.sql` and shared/server/company portability support.
- Rendered recovery/system notices in issue chat with dedicated UI
components, fixtures, tests, and storybook/lab coverage.
- Included the current recovery model-profile hint patch so automatic
recovery follow-ups use the cheap profile.

## Verification

- `pnpm install --frozen-lockfile`
- `pnpm exec vitest run
server/src/services/recovery/successful-run-handoff.test.ts
ui/src/components/SystemNotice.test.tsx
ui/src/lib/system-notice-comment.test.ts
ui/src/components/IssueChatThreadSystemNotice.test.tsx`

## Risks

- Migration-bearing PR: merge this before any other branch that might
later add a migration.
- The branch touches both recovery services and issue-thread rendering,
so review should pay attention to recovery wake idempotency and comment
metadata compatibility.

## Model Used

- OpenAI GPT-5 Codex via Paperclip `codex_local` adapter, with
shell/git/GitHub CLI tool use.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-06 06:05:58 -05:00
Dotta d6d7a7cea6 Add routine revision history and restore flow (#5285)
## Thinking Path

> - Paperclip is the control plane for autonomous AI companies.
> - Routines are the scheduled/recurring work surface that keeps a
company operating without manual kicks.
> - Operators need routine edits to be auditable and recoverable,
especially when routines control assignments, prompts, triggers, and
webhook secrets.
> - Documents already have revision-style safety, but routines did not
have equivalent history or restore semantics.
> - This pull request adds append-only routine revisions across the
database, shared contracts, server routes, and board UI.
> - The benefit is safer routine iteration: users can inspect history,
compare changes, restore older definitions, and avoid overwriting newer
edits.

## What Changed

- Added `routine_revisions` storage, latest revision pointers on
routines, shared types, validators, and API docs for routine revision
history.
- Added server service/route support for listing routine revisions,
conflict-aware routine saves, and append-only restore operations.
- Added a History tab on routine detail with revision preview,
structured change summaries, description line diffs, dirty-edit
blocking, restore confirmation, and restored webhook secret surfacing.
- Extracted the line diff helper from `DocumentDiffModal` into
`ui/src/lib/line-diff.ts` for reuse.
- Rebased the branch onto current `public-gh/master` and renumbered the
routine revision migration to `0077_unusual_karnak` after upstream
`0076_useful_elektra`.
- Made the `0077` routine revision migration idempotent so installs that
already applied the branch-local `0076_unusual_karnak` can safely
advance.
- Updated the plugin SDK test harness routine fixture with the new
revision fields required by the shared `Routine` contract.

## Verification

- `pnpm --filter @paperclipai/db run check:migrations` passed.
- `pnpm exec vitest run --project @paperclipai/shared
packages/shared/src/validators/routine.test.ts` passed.
- `pnpm exec vitest run --project @paperclipai/ui
ui/src/lib/line-diff.test.ts
ui/src/components/RoutineHistoryTab.test.tsx
ui/src/lib/workspace-routines.test.ts ui/src/pages/Routines.test.tsx`
passed.
- `pnpm exec vitest run --project @paperclipai/server
server/src/__tests__/routines-service.test.ts --pool=forks
--poolOptions.forks.isolate=true` passed.
- `pnpm exec vitest run --project @paperclipai/server
server/src/__tests__/routines-routes.test.ts --pool=forks
--poolOptions.forks.isolate=true` passed.
- `pnpm --filter @paperclipai/plugin-sdk typecheck` passed after
updating the SDK test harness fixture.
- `pnpm --filter @paperclipai/plugin-sdk build` passed; this refreshed
local generated SDK output needed by plugin example typechecks.
- `pnpm -r typecheck` passed.

## Risks

- Medium migration risk: this adds routine revision storage and
backfills existing routines. The migration is ordered after upstream
`0076` and uses `IF NOT EXISTS` / duplicate-object guards to tolerate
earlier branch-local migration application.
- Restore behavior intentionally appends a new revision instead of
mutating history; callers expecting an in-place rollback need to follow
the new latest revision pointer.
- Restoring webhook triggers recreates webhook secret material, so users
must copy newly surfaced secrets after restore.
- Conflict-aware saves now reject stale routine edits when the client
sends an older `baseRevisionId`.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5-based coding agent, with shell/tool use in a local
git worktree. Exact context-window size is not exposed in this runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

Screenshots: not attached in this draft PR; the new UI flow is covered
by component tests listed above.

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-05 11:54:52 -05:00
Dotta 3c73ed26b5 Expand plugin host surface (#5205)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies
> - The plugin system is the extension boundary for optional product
capabilities
> - Rich plugins need more than a worker entrypoint: they need scoped
database storage, local project folders, managed agents/routines, host
navigation, and reusable UI components
> - The LLM Wiki work exposed those missing host surfaces while keeping
plugin code outside the core control plane
> - This pull request expands the core plugin host, SDK, server APIs,
and UI bridge so plugins can declare and use those surfaces
> - The benefit is that future plugins can integrate with Paperclip
through documented, validated contracts instead of bespoke server or UI
imports

## What Changed

- Added plugin-managed database namespaces and migration tracking,
including Drizzle schema/migration files and SQL validation for
namespace isolation.
- Added server support for plugin local folders, managed agents, managed
routines, scoped plugin APIs, and plugin operation visibility.
- Expanded shared plugin manifest/types/validators and SDK
host/testing/UI exports for richer plugin surfaces.
- Added reusable UI pieces for file trees, managed routines, resizable
sidebars, route sidebars, and plugin bridge initialization.
- Updated plugin docs and example plugins to use the expanded host and
SDK surface.

## Verification

- `pnpm install --frozen-lockfile`
- `pnpm run preflight:workspace-links && pnpm exec vitest run
packages/shared/src/validators/plugin.test.ts
server/src/__tests__/plugin-database.test.ts
server/src/__tests__/plugin-local-folders.test.ts
server/src/__tests__/plugin-managed-agents.test.ts
server/src/__tests__/plugin-managed-routines.test.ts
server/src/__tests__/plugin-orchestration-apis.test.ts
ui/src/api/plugins.test.ts ui/src/components/FileTree.test.tsx
ui/src/components/ResizableSidebarPane.test.tsx
ui/src/pages/PluginPage.test.tsx ui/src/plugins/bridge.test.ts` passed:
11 files, 67 tests.
- Confirmed this PR changes 89 files and does not include
`pnpm-lock.yaml` or `.github/workflows/*`.

## Risks

- Medium: this expands plugin host contracts across db/shared/server/ui
and includes a new core migration (`0076_useful_elektra.sql`).
- The plugin database namespace validator is intentionally restrictive;
plugin authors may need follow-up affordances for SQL patterns that
remain blocked.
- Merge this before the LLM Wiki plugin PR so the plugin can resolve the
new SDK and host APIs.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5 coding agent, tool-enabled shell/git/GitHub
workflow. Context window size was not exposed by the runtime.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-05-05 07:42:57 -05:00
Devin Foley 868d08903e test: isolate CLI company import e2e state (#4560)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies, and its
CLI import/export path is part of how operators move company state
safely between environments.
> - The `paperclipai company import/export` e2e test is supposed to
validate that portability flow inside a hermetic harness, not against a
developer's live Paperclip home.
> - This regression showed nested CLI subprocesses could silently fall
back to ambient `PAPERCLIP_*` state and mutate a real local instance by
creating extra companies such as `CLI-1-Roundtrip-Test`.
> - The first job was to pin the test subprocesses to isolated config,
home, instance, auth, and context paths, and to add a regression
assertion that proves the nested CLI writes stay inside the test-owned
state.
> - Once the PR was up, CI and Greptile exposed two follow-on issues
that were blocking merge: plugin SDK typecheck bootstrap was racing
across packages in fresh CI, and the new lock helper needed one more fix
to release its lock on failure.
> - This pull request therefore ends up doing two tightly related
things: fixing the original CLI isolation leak, and hardening the
supporting typecheck/bootstrap path enough for the fix to verify cleanly
in CI.
> - The benefit is that the portability e2e test is now actually
isolated, and the PR verification path is stable enough to catch
regressions instead of introducing its own nondeterministic failures.

## What Changed

- Hardened `cli/src/__tests__/company-import-export-e2e.test.ts` so
nested CLI subprocesses re-seed isolated `PAPERCLIP_CONFIG`,
`PAPERCLIP_HOME`, `PAPERCLIP_INSTANCE_ID`, `PAPERCLIP_CONTEXT`,
`PAPERCLIP_AUTH_STORE`, and throwaway `HOME` values instead of falling
back to ambient machine state.
- Added a regression assertion around `paperclipai context set --json`,
then cleared the temporary `context.json` so the isolation check and the
later export/import flow stay independent.
- Passed the same isolated `HOME` into the server subprocess so both
sides of the e2e harness are symmetric.
- Introduced locking in `scripts/ensure-plugin-build-deps.mjs` and
switched the server/plugin example `typecheck` scripts to use that
helper instead of launching concurrent raw `@paperclipai/plugin-sdk`
builds.
- Fixed the helper failure path so it releases the lock before exiting
non-zero, which prevents stale-lock timeouts during parallel typecheck
runs.

## Verification

- `pnpm vitest run cli/src/__tests__/company-import-export-e2e.test.ts
--project paperclipai`
- `pnpm --filter paperclipai typecheck`
- `pnpm -r typecheck`
- PR checks now pass on the current head, including `policy`, `verify`,
`e2e`, `security/snyk`, and `Greptile Review`.

## Risks

- Low risk. The product-facing behavior change is scoped to test harness
code in the CLI e2e suite.
- The CI stabilization changes only affect bootstrap/typecheck helper
paths for the server and plugin/example packages, but they do touch
shared verification plumbing; the main risk is changing how fresh build
artifacts are prepared in local/CI typecheck runs.

## Model Used

- Anthropic Claude via Paperclip `claude_local`, model
`claude-opus-4-7`, high-effort local coding agent, used for the initial
implementation and first peer-reviewed verification.
- OpenAI Codex via Paperclip `codex_local`, model `gpt-5.4`, high
reasoning-effort local coding agent with tool use, used for CI triage,
Greptile follow-up fixes, verification, and PR maintenance.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-04-26 19:10:01 -07:00
Devin Foley 70679a3321 Add sandbox environment support (#4415)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - The environment/runtime layer decides where agent work executes and
how the control plane reaches those runtimes.
> - Today Paperclip can run locally and over SSH, but sandboxed
execution needs a first-class environment model instead of one-off
adapter behavior.
> - We also want sandbox providers to be pluggable so the core does not
hardcode every provider implementation.
> - This branch adds the Sandbox environment path, the provider
contract, and a deterministic fake provider plugin.
> - That required synchronized changes across shared contracts, plugin
SDK surfaces, server runtime orchestration, and the UI
environment/workspace flows.
> - The result is that sandbox execution becomes a core control-plane
capability while keeping provider implementations extensible and
testable.

## What Changed

- Added sandbox runtime support to the environment execution path,
including runtime URL discovery, sandbox execution targeting,
orchestration, and heartbeat integration.
- Added plugin-provider support for sandbox environments so providers
can be supplied via plugins instead of hardcoded server logic.
- Added the fake sandbox provider plugin with deterministic behavior
suitable for local and automated testing.
- Updated shared types, validators, plugin protocol definitions, and SDK
helpers to carry sandbox provider and workspace-runtime contracts across
package boundaries.
- Updated server routes and services so companies can create sandbox
environments, select them for work, and execute work through the sandbox
runtime path.
- Updated the UI environment and workspace surfaces to expose sandbox
environment configuration and selection.
- Added test coverage for sandbox runtime behavior, provider seams,
environment route guards, orchestration, and the fake provider plugin.

## Verification

- Ran locally before the final fixture-only scrub:
  - `pnpm -r typecheck`
  - `pnpm test:run`
  - `pnpm build`
- Ran locally after the final scrub amend:
  - `pnpm vitest run server/src/__tests__/runtime-api.test.ts`
- Reviewer spot checks:
  - create a sandbox environment backed by the fake provider plugin
  - run work through that environment
- confirm sandbox provider execution does not inherit host secrets
implicitly

## Risks

- This touches shared contracts, plugin SDK plumbing, server runtime
orchestration, and UI environment/workspace flows, so regressions would
likely show up as cross-layer mismatches rather than isolated type
errors.
- Runtime URL discovery and sandbox callback selection are sensitive to
host/bind configuration; if that logic is wrong, sandbox-backed
callbacks may fail even when execution succeeds.
- The fake provider plugin is intentionally deterministic and
test-oriented; future providers may expose capability gaps that this
branch does not yet cover.

## Model Used

- OpenAI Codex coding agent on a GPT-5-class backend in the
Paperclip/Codex harness. Exact backend model ID is not exposed
in-session. Tool-assisted workflow with shell execution, file editing,
git history inspection, and local test execution.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge
2026-04-24 12:15:53 -07:00
Dotta a957394420 [codex] Add structured issue-thread interactions (#4244)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - Operators supervise that work through issues, comments, approvals,
and the board UI.
> - Some agent proposals need structured board/user decisions, not
hidden markdown conventions or heavyweight governed approvals.
> - Issue-thread interactions already provide a natural thread-native
surface for proposed tasks and questions.
> - This pull request extends that surface with request confirmations,
richer interaction cards, and agent/plugin/MCP helpers.
> - The benefit is that plan approvals and yes/no decisions become
explicit, auditable, and resumable without losing the single-issue
workflow.

## What Changed

- Added persisted issue-thread interactions for suggested tasks,
structured questions, and request confirmations.
- Added board UI cards for interaction review, selection, question
answers, and accept/reject confirmation flows.
- Added MCP and plugin SDK helpers for creating interaction cards from
agents/plugins.
- Updated agent wake instructions, onboarding assets, Paperclip skill
docs, and public docs to prefer structured confirmations for
issue-scoped decisions.
- Rebased the branch onto `public-gh/master` and renumbered branch
migrations to `0063` and `0064`; the idempotency migration uses `ADD
COLUMN IF NOT EXISTS` for old branch users.

## Verification

- `git diff --check public-gh/master..HEAD`
- `pnpm exec vitest run packages/adapter-utils/src/server-utils.test.ts
packages/mcp-server/src/tools.test.ts
packages/shared/src/issue-thread-interactions.test.ts
ui/src/lib/issue-thread-interactions.test.ts
ui/src/lib/issue-chat-messages.test.ts
ui/src/components/IssueThreadInteractionCard.test.tsx
ui/src/components/IssueChatThread.test.tsx
server/src/__tests__/issue-thread-interaction-routes.test.ts
server/src/__tests__/issue-thread-interactions-service.test.ts
server/src/services/issue-thread-interactions.test.ts` -> 9 files / 79
tests passed
- `pnpm -r typecheck` -> passed, including `packages/db` migration
numbering check

## Risks

- Medium: this adds a new issue-thread interaction model across
db/shared/server/ui/plugin surfaces.
- Migration risk is reduced by placing this branch after current master
migrations (`0063`, `0064`) and making the idempotency column add
idempotent for users who applied the old branch numbering.
- UI interaction behavior is covered by component tests, but this PR
does not include browser screenshots.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

## Model Used

- OpenAI Codex, GPT-5-class coding agent runtime. Exact model ID and
context window are not exposed in this Paperclip run; tool use and local
shell/code execution were enabled.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [ ] If this change affects the UI, I have included before/after
screenshots
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-04-21 20:15:11 -05:00
Dotta 9c6f551595 [codex] Add plugin orchestration host APIs (#4114)
## Thinking Path

> - Paperclip orchestrates AI agents for zero-human companies.
> - The plugin system is the extension path for optional capabilities
that should not require core product changes for every integration.
> - Plugins need scoped host APIs for issue orchestration, documents,
wakeups, summaries, activity attribution, and isolated database state.
> - Without those host APIs, richer plugins either cannot coordinate
Paperclip work safely or need privileged core-side special cases.
> - This pull request adds the plugin orchestration host surface, scoped
route dispatch, a database namespace layer, and a smoke plugin that
exercises the contract.
> - The benefit is a broader plugin API that remains company-scoped,
auditable, and covered by tests.

## What Changed

- Added plugin orchestration host APIs for issue creation, document
access, wakeups, summaries, plugin-origin activity, and scoped API route
dispatch.
- Added plugin database namespace tables, schema exports, migration
checks, and idempotent replay coverage under migration
`0059_plugin_database_namespaces`.
- Added shared plugin route/API types and validators used by server and
SDK boundaries.
- Expanded plugin SDK types, protocol helpers, worker RPC host behavior,
and testing utilities for orchestration flows.
- Added the `plugin-orchestration-smoke-example` package to exercise
scoped routes, restricted database namespaces, issue orchestration,
documents, wakeups, summaries, and UI status surfaces.
- Kept the new orchestration smoke fixture out of the root pnpm
workspace importer so this PR preserves the repository policy of not
committing `pnpm-lock.yaml`.
- Updated plugin docs and database docs for the new orchestration and
database namespace surfaces.
- Rebased the branch onto `public-gh/master`, resolved conflicts, and
removed `pnpm-lock.yaml` from the final PR diff.

## Verification

- `pnpm install --frozen-lockfile`
- `pnpm --filter @paperclipai/db typecheck`
- `pnpm exec vitest run packages/db/src/client.test.ts`
- `pnpm exec vitest run server/src/__tests__/plugin-database.test.ts
server/src/__tests__/plugin-orchestration-apis.test.ts
server/src/__tests__/plugin-routes-authz.test.ts
server/src/__tests__/plugin-scoped-api-routes.test.ts
server/src/__tests__/plugin-sdk-orchestration-contract.test.ts`
- From `packages/plugins/examples/plugin-orchestration-smoke-example`:
`pnpm exec vitest run --config ./vitest.config.ts`
- `pnpm --dir
packages/plugins/examples/plugin-orchestration-smoke-example run
typecheck`
- `pnpm --filter @paperclipai/server typecheck`
- PR CI on latest head `293fc67c`: `policy`, `verify`, `e2e`, and
`security/snyk` all passed.

## Risks

- Medium risk: this expands plugin host authority, so route auth,
company scoping, and plugin-origin activity attribution need careful
review.
- Medium risk: database namespace migration behavior must remain
idempotent for environments that may have seen earlier branch versions.
- Medium risk: the orchestration smoke fixture is intentionally excluded
from the root workspace importer to avoid a `pnpm-lock.yaml` PR diff;
direct fixture verification remains listed above.
- Low operational risk from the PR setup itself: the branch is rebased
onto current `master`, the migration is ordered after upstream
`0057`/`0058`, and `pnpm-lock.yaml` is not in the final diff.

> For core feature work, check [`ROADMAP.md`](ROADMAP.md) first and
discuss it in `#dev` before opening the PR. Feature PRs that overlap
with planned core work may need to be redirected — check the roadmap
first. See `CONTRIBUTING.md`.

Roadmap checked: this work aligns with the completed Plugin system
milestone and extends the plugin surface rather than duplicating an
unrelated planned core feature.

## Model Used

- OpenAI Codex, GPT-5-based coding agent in a tool-enabled CLI
environment. Exact hosted model build and context-window size are not
exposed by the runtime; reasoning/tool use were enabled for repository
inspection, editing, testing, git operations, and PR creation.

## Checklist

- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] If this change affects the UI, I have included before/after
screenshots (N/A: no core UI screen change; example plugin UI contract
is covered by tests)
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] I will address all Greptile and reviewer comments before
requesting merge

---------

Co-authored-by: Paperclip <noreply@paperclip.ing>
2026-04-20 08:52:51 -05:00
HenkDz 14d59da316 feat(adapters): external adapter plugin system with dynamic UI parser
- Plugin loader: install/reload/remove/reinstall external adapters
  from npm packages or local directories
- Plugin store persisted at ~/.paperclip/adapter-plugins.json
- Self-healing UI parser resolution with version caching
- UI: Adapter Manager page, dynamic loader, display registry
  with humanized names for unknown adapter types
- Dev watch: exclude adapter-plugins dir from tsx watcher
  to prevent mid-request server restarts during reinstall
- All consumer fallbacks use getAdapterLabel() for consistent display
- AdapterTypeDropdown uses controlled open state for proper close behavior
- Remove hermes-local from built-in UI (externalized to plugin)
- Add docs for external adapters and UI parser contract
2026-04-03 21:11:20 +01:00
dotta af844b778e Add plugin telemetry bridge capability
Expose telemetry.track through the plugin SDK and server host bridge, forward plugin-prefixed events into the shared telemetry client, and demonstrate the capability in the kitchen sink example.\n\nCo-Authored-By: Paperclip <noreply@paperclip.ing>
2026-04-02 10:47:29 -05:00
dotta ec1210caaa Preserve workspaces for follow-up issues
Co-Authored-By: Paperclip <noreply@paperclip.ing>
2026-03-30 14:10:36 -05:00
dotta 0036f0e9a1 fix: add npm provenance package metadata 2026-03-17 16:01:48 -05:00
Dotta 794ba59bb6 Merge remote-tracking branch 'public-gh/master' into paperclip-subissues
* public-gh/master:
  fix(plugins): address Greptile feedback on testing.ts
  feat(plugins): add document CRUD methods to Plugin SDK
2026-03-16 19:51:09 -05:00
Justin Miller 56985a320f fix(plugins): address Greptile feedback on testing.ts
Remove unnecessary `as any` casts on capability strings (now valid
PluginCapability members) and add company-membership guards to match
production behavior in plugin-host-services.ts.
2026-03-16 16:01:00 -06:00
Justin Miller 0d4dd50b35 feat(plugins): add document CRUD methods to Plugin SDK
Wire issue document list/get/upsert/delete operations through the
JSON-RPC protocol so plugins can manage issue documents with the same
capabilities available via the REST API.

Fixes #940
2026-03-16 15:53:50 -06:00
Dotta 0c121b856f Merge remote-tracking branch 'public-gh/master' into paperclip-subissues
* public-gh/master: (51 commits)
  Use attachment-size limit for company logos
  Address Greptile company logo feedback
  Drop lockfile from PR branch
  Use asset-backed company logos
  fix: use appType "custom" for Vite dev server so worktree branding is applied
  docs: fix documentation drift — adapters, plugins, tech stack
  docs: update documentation for accuracy after plugin system launch
  chore: ignore superset artifacts
  Dark theme for CodeMirror code blocks in MDXEditor
  Remove duplicate @paperclipai/adapter-openclaw-gateway in server/package.json
  Fix code block styles with robust prose overrides
  Add Docker setup for untrusted PR review in isolated containers
  Fix org chart canvas height to fit viewport without scrolling
  Add doc-maintenance skill for periodic documentation accuracy audits
  Fix sidebar scrollbar: hide track background when not hovering
  Restyle markdown code blocks: dark background, smaller font, compact padding
  Add archive project button and filter archived projects from selectors
  fix: address review feedback — subscription cleanup, filter nullability, stale diagram
  fix: wire plugin event subscriptions from worker to host
  fix(ui): hide scrollbar track background when sidebar is not hovered
  ...

# Conflicts:
#	packages/db/src/migrations/meta/0030_snapshot.json
#	packages/db/src/migrations/meta/_journal.json
2026-03-16 16:02:37 -05:00
HD 8468d347be fix: address review feedback — subscription cleanup, filter nullability, stale diagram
- Add scopedBus.clear() in dispose() to prevent subscription accumulation
  on worker crash/restart cycles
- Use two-arg subscribe() overload when filter is null instead of passing
  empty object; fix filter type to include null
- Update ASCII flow diagram: onEvent is a notification, not request/response
2026-03-16 02:25:03 +07:00
HD 61fd5486e8 fix: wire plugin event subscriptions from worker to host
Plugin workers register event handlers via `ctx.events.on()` in the SDK,
but these subscriptions were never forwarded to the host process. The host
sends events via `notifyWorker("onEvent", ...)` which produces a JSON-RPC
notification (no `id`), but the worker only dispatched `onEvent` as a
request handler — notifications were silently dropped.

Changes:
- Add `events.subscribe` RPC method so workers can register subscriptions
  on the host-side event bus during setup
- Handle `onEvent` notifications in the worker notification dispatcher
  (previously only `agents.sessions.event` was handled)
- Add `events.subscribe` to HostServices interface, capability map, and
  host client handler
- Add `subscribe` handler in host services that registers on the scoped
  plugin event bus and forwards matched events to the worker
2026-03-16 02:10:10 +07:00
gsxdsm 811e2b9909 Add globalToolbarButton slot type and update related documentation 2026-03-14 15:05:04 -07:00
Dotta 6e6d67372c Merge remote-tracking branch 'public-gh/master' into paperclip-subissues
* public-gh/master:
  Drop lockfile from watcher change
  Tighten plugin dev file watching
  Fix plugin smoke example typecheck
  Fix plugin dev watcher and migration snapshot
  Clarify plugin authoring and external dev workflow
  Expand kitchen sink plugin demos
  fix: set AGENT_HOME env var for agent processes
  Add kitchen sink plugin example
  Simplify plugin runtime and cleanup lifecycle
  Add plugin framework and settings UI

# Conflicts:
#	packages/db/src/migrations/meta/0029_snapshot.json
#	packages/db/src/migrations/meta/_journal.json
2026-03-14 13:56:09 -05:00
Dotta 30888759f2 Clarify plugin authoring and external dev workflow 2026-03-14 10:40:21 -05:00
Dotta cb5d7e76fb Expand kitchen sink plugin demos 2026-03-14 09:26:45 -05:00
Dotta 12ccfc2c9a Simplify plugin runtime and cleanup lifecycle 2026-03-13 16:58:29 -05:00
Dotta 80cdbdbd47 Add plugin framework and settings UI 2026-03-13 16:22:34 -05:00